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SCNpilot_expt_300_bf_scaffold_1041

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1041_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144..989)
DNA (846bp) protein (282aa)
Esterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI3_9GAMM rbh
S-formylglutathione hydrolase
S-formylglutathione hydrolase {ECO:0000313|EMBL:AGG88312.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
SCNpilot_expt_300_bf_scaffold_1041_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1368..2945
DNA (1578bp) protein (526aa)
DNA/RNA helicase, superfamily II (EC:5.99.1.-)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=666685 species
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI2_9GAMM rbh
SCNpilot_expt_300_bf_scaffold_1041_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2972..3358)
DNA (387bp) protein (129aa)
Putative Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFC0_9GAMM
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AGG88308.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
SCNpilot_expt_300_bf_scaffold_1041_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3469..4254)
DNA (786bp) protein (262aa)
Zinc metallopeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJE4_9GAMM rbh
Zinc metallopeptidase {ECO:0000313|EMBL:EIL87335.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter ful
metallopeptidase
SCNpilot_expt_300_bf_scaffold_1041_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4363..4755
DNA (393bp) protein (131aa)
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ90_9GAMM
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) {ECO:0000313|EMBL:EIM01632.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
MAPEG family
SCNpilot_expt_300_bf_scaffold_1041_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4767..5543)
DNA (777bp) protein (259aa)
Putative methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P7_9GAMM rbh
Putative methyltransferase {ECO:0000313|EMBL:EIL94788.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1041_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5665..6510
DNA (846bp) protein (282aa)
Putative metal-dependent membrane protease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ89_9GAMM
Putative metal-dependent membrane protease {ECO:0000313|EMBL:EIM01631.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
putative metal-dependent membrane protease
SCNpilot_expt_300_bf_scaffold_1041_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6518..6919)
DNA (402bp) protein (134aa)
Maf-like protein UUA_03793 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ88_9GAMM
Maf-like protein UUA_03793 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
MAF protein
SCNpilot_expt_300_bf_scaffold_1041_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7051..7581)
DNA (531bp) protein (177aa)
Acetyltransferase, GNaT family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P4_9GAMM
Acetyltransferase, GNaT family protein {ECO:0000313|EMBL:EIL94785.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
acetyltransferase
SCNpilot_expt_300_bf_scaffold_1041_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7731..8201)
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rR
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Rhodanobacter denitrificans RepID=M4NED8_9GAMM
rRNA large subunit m3Psi methyltransferase RlmH
SCNpilot_expt_300_bf_scaffold_1041_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8311..8697)
DNA (387bp) protein (129aa)
Ribosomal silencing factor RsfS n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ85_9GAMM
iojap-like ribosome-associated protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
iojap-like ribosome-associated protein
SCNpilot_expt_300_bf_scaffold_1041_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8800..9867)
DNA (1068bp) protein (356aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P0_9GAMM rbh
Putative oxidoreductase {ECO:0000313|EMBL:EIL94781.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
2-nitropropane dioxygenase-like enzyme
SCNpilot_expt_300_bf_scaffold_1041_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9931..10119)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ83_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01625.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
pentapeptide MXKDX repeat protein
SCNpilot_expt_300_bf_scaffold_1041_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10215..10916)
DNA (702bp) protein (234aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG8_9GAMM rbh
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1041_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10937..11212)
DNA (276bp) protein (92aa)
Acetyltransferase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N7_9GAMM
putative acetyltransferase
Acetyltransferase-like protein {ECO:0000313|EMBL:EIL94778.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
SCNpilot_expt_300_bf_scaffold_1041_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11355..11780
DNA (426bp) protein (142aa)
Osmotically inducible protein OsmC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N6_9GAMM
Osmotically inducible protein OsmC {ECO:0000313|EMBL:EIL94777.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
peroxiredoxin, OsmC subfamily
SCNpilot_expt_300_bf_scaffold_1041_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11782..12864)
DNA (1083bp) protein (361aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG5_9GAMM rbh
SCNpilot_expt_300_bf_scaffold_1041_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13097..14032
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCD0_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88294.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_expt_300_bf_scaffold_1041_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14127..15371
DNA (1245bp) protein (415aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
Nuclease-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG3_9GAMM
nuclease-like protein
SCNpilot_expt_300_bf_scaffold_1041_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15418..15882
DNA (465bp) protein (155aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
Nuclease-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ77_9GAMM
nuclease-like protein
SCNpilot_expt_300_bf_scaffold_1041_21
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16040..16612)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DE965
Relaxation protein {ECO:0000313|EMBL:EYR68777.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78
relaxation protein
SCNpilot_expt_300_bf_scaffold_1041_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16644..17570)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036C2F30 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89728.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1041_23
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17554..18021)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FKH7_9XANT
Uncharacterized protein {ECO:0000313|EMBL:ENZ93894.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fraga
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1041_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18046..18654)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR88_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89729.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1041_25
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18866..19333
DNA (468bp) protein (156aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQB1_PSEUU
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ADV26360.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="
Displaying 25 items

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