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SCNpilot_expt_300_bf_scaffold_1297

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1297_1
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..648)
DNA (648bp) protein (216aa)
Citrate synthase (si (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
Citrate synthase n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XIS1_ALCXX
SCNpilot_expt_300_bf_scaffold_1297_2
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(696..959)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RBB3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHD19095.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacch
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1297_3
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(964..1680)
DNA (717bp) protein (239aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
Succinate dehydrogenase iron-sulfur subunit n=37 Tax=Bordetella RepID=F4LF94_BORPC rbh
SCNpilot_expt_300_bf_scaffold_1297_4
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1790..3568)
DNA (1779bp) protein (593aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase subunit A n=1 Tax=Ralstonia pickettii OR214 RepID=R0DME5_RALPI rbh
SCNpilot_expt_300_bf_scaffold_1297_5
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3572..3955)
DNA (384bp) protein (128aa)
Succinate dehydrogenase hydrophobic membrane anchor protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4J8B9_9BURK
sdhD; succinate dehydrogenase hydrophobic membrane anchor protein
Succinate dehydrogenase hydrophobic membrane anchor protein {ECO:0000313|EMBL:EJO32159.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromo
SCNpilot_expt_300_bf_scaffold_1297_6
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3955..4368)
DNA (414bp) protein (138aa)
Succinate dehydrogenase cytochrome B subunit n=39 Tax=Bordetella RepID=F4LF97_BORPC
sdhC; succinate dehydrogenase cytochrome B subunit
Succinate dehydrogenase cytochrome B subunit {ECO:0000313|EMBL:CAE42635.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="B
SCNpilot_expt_300_bf_scaffold_1297_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4584..5393)
DNA (810bp) protein (270aa)
GntR family Transcriptional regulator n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UF38_ALCXX rbh
DNA-binding transcriptional regulator FrlR {ECO:0000313|EMBL:CKH06250.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="A
GntR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1297_8
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5703..6689
DNA (987bp) protein (329aa)
mdh; malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1331212 species="Bacteria; P
Malate dehydrogenase n=2 Tax=Bordetella holmesii RepID=M5P0G5_9BORD rbh
SCNpilot_expt_300_bf_scaffold_1297_9
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6993..7988
DNA (996bp) protein (332aa)
Lyase, putative n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2T7J3_BURTA rbh
hpcH/HpaI aldolase/citrate lyase family protein
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:AIP28487.1}; Lyase, putative {ECO:0000313|EMBL:ABC33945.1}; TaxID=271848 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
SCNpilot_expt_300_bf_scaffold_1297_10
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8005..8679)
DNA (675bp) protein (225aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:KCB44917.1}; EC=1.1.1.290 {ECO:0000313|EMBL:KCB44917.1};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alc
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain-containing protein 7 n=1 Tax=Achromobacter piechaudii HLE RepID=J4YJN8_9BURK
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein
SCNpilot_expt_300_bf_scaffold_1297_11
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8916..9875)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QWT0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ETF04082.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1297_12
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9911..11071)
DNA (1161bp) protein (387aa)
2-oxo-3-deoxygalactonate 6-phosphate aldolase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXL1_9BURK rbh
2-oxo-3-deoxygalactonate 6-phosphate aldolase {ECO:0000313|EMBL:ETF04083.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella k
mandelate racemase
SCNpilot_expt_300_bf_scaffold_1297_13
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11192..12097
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QZF0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDP87424.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK
cynR; DNA-binding transcriptional regulator CynR
SCNpilot_expt_300_bf_scaffold_1297_14
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12110..12313)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Pseudogulbenkiania RepID=B9Z3A0_9NEIS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG09053.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenk
SCNpilot_expt_300_bf_scaffold_1297_15
unknown

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12501..13445
DNA (945bp) protein (315aa)

This feature has no annotations

Displaying 15 items

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