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SCNpilot_expt_300_bf_scaffold_473

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_473_1
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1285)
DNA (1284bp) protein (428aa)
Isocitrate dehydrogenase, NADP-dependent, Icd n=3 Tax=Azotobacter vinelandii RepID=C1DL01_AZOVD
icd; isocitrate dehydrogenase, NADP-dependent, Icd Tax=GWC1_Azotobacter_66_9_curated
icd; isocitrate dehydrogenase, NADP-dependent, Icd
SCNpilot_expt_300_bf_scaffold_473_2
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1489..2748)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003682222 rbh
Peptidase {ECO:0000313|EMBL:KJK24762.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
Cell division protein FtsL
SCNpilot_expt_300_bf_scaffold_473_3
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..3936
DNA (915bp) protein (305aa)
Membrane protein 22 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T4H3_ALCXX rbh
Membrane protein 22 {ECO:0000313|EMBL:EGP44803.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis
membrane protein
SCNpilot_expt_300_bf_scaffold_473_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4038..5234
DNA (1197bp) protein (399aa)
Probable transporter protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IHY2_BORPD rbh
transporter protein
Probable transporter protein {ECO:0000313|EMBL:CAP42008.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii
SCNpilot_expt_300_bf_scaffold_473_5
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5375..6343)
DNA (969bp) protein (323aa)
ABC transporter substrate-binding protein n=2 Tax=Ralstonia pickettii RepID=U3QS03_RALPI rbh
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGW92928.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ra
SCNpilot_expt_300_bf_scaffold_473_6
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6487..7260)
DNA (774bp) protein (258aa)
Putative transcriptional regulator, TetR C_term domain n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AHS0_CUPTR rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EYS86843.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
transcriptional regulator TetR family
SCNpilot_expt_300_bf_scaffold_473_7
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7346..8494)
DNA (1149bp) protein (383aa)
Monooxygenase n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E9K3_9BURK rbh
Monooxygenase {ECO:0000313|EMBL:EKZ96030.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
monooxygenase
SCNpilot_expt_300_bf_scaffold_473_8
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8491..9342)
DNA (852bp) protein (284aa)
Putative Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AHR5_CUPTR rbh
glyoxalase/bleomycin resistance protein/dioxygenase
Putative Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CAP63314.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupri
SCNpilot_expt_300_bf_scaffold_473_9
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9339..11030)
DNA (1692bp) protein (564aa)
entE; 2,3-dihydroxybenzoate-AMP ligase (EC:2.7.7.58 6.3.2.-)
2,3-dihydroxybenzoate-AMP ligase, Enterobactin synthetase component E, AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CAP63313.1}; EC=2.7.7.58 {ECO:0000313|EMBL:CAP63313.1};; EC=6.3.2.- {ECO:00
2,3-dihydroxybenzoate-AMP ligase, Enterobactin synthetase component E, AMP-dependent synthetase and ligase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AHR4_CUPTR rbh
SCNpilot_expt_300_bf_scaffold_473_10
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11044..12297)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00030650C6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYS86850.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-
hypothetical protein
SCNpilot_expt_300_bf_scaffold_473_11
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12467..14467
DNA (2001bp) protein (667aa)
chemotaxis protein CheY n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000375CCDB rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KDR42321.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathe
PAS/PAC sensor hybrid histidine kinase
SCNpilot_expt_300_bf_scaffold_473_12
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14457..15098
DNA (642bp) protein (214aa)
glutathione S-transferase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003675A3F rbh
Glutathione S-transferase {ECO:0000313|EMBL:KFA93409.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
glutathione S-transferase domain-containing protein
SCNpilot_expt_300_bf_scaffold_473_13
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15105..17054)
DNA (1950bp) protein (650aa)
Transporter, betaine/carnitine/choline family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X8U8_9BURK rbh
Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EFF76807.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" sourc
high-affinity choline transporter
SCNpilot_expt_300_bf_scaffold_473_14
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17167..18135
DNA (969bp) protein (323aa)
Extra-cytoplasmic solute receptor protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FFE2_9BURK
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:EHK63034.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="A
hypothetical protein
SCNpilot_expt_300_bf_scaffold_473_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18143..18565
DNA (423bp) protein (141aa)
UPI0003D3C87C related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3C87C
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:GAD23757.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
endoribonuclease L-PSP
SCNpilot_expt_300_bf_scaffold_473_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18547..19230)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003760E64
cyclic nucleotide-binding domain-containing protein 4
Uncharacterized protein {ECO:0000313|EMBL:GAD23759.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
SCNpilot_expt_300_bf_scaffold_473_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19342..20619
DNA (1278bp) protein (426aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ABX32780.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ABX32780.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQS8_DELAS rbh
SCNpilot_expt_300_bf_scaffold_473_18
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20600..21337)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZK13_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ13837.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_473_19
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21348..22664)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344A99B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP56351.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
SCNpilot_expt_300_bf_scaffold_473_20
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22661..23989)
DNA (1329bp) protein (443aa)
Peptidase family M28 n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XV25_9RHIZ rbh
Peptidase family M28 {ECO:0000313|EMBL:EMS41478.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium
putative aminopeptidase
SCNpilot_expt_300_bf_scaffold_473_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23986..24657)
DNA (672bp) protein (224aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_16_Betaproteobacteria_64_18_curated
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR95_9PROT
SCNpilot_expt_300_bf_scaffold_473_22
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24704..25672)
DNA (969bp) protein (323aa)
Putative exported protein n=3 Tax=Bordetella RepID=Q7W6W7_BORPA
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CAE38070.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertu
SCNpilot_expt_300_bf_scaffold_473_23
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25751..26692)
DNA (942bp) protein (314aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F2C8_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK67539.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
transcriptional regulator, LysR family
SCNpilot_expt_300_bf_scaffold_473_24
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26820..27857
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=F6C0G4_SINMB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG07686.1}; Flags: Precursor;; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; S
SCNpilot_expt_300_bf_scaffold_473_25
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27884..28858
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6C0G3_SINMB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG07685.1}; Flags: Precursor;; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; S
SCNpilot_expt_300_bf_scaffold_473_26
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28879..29685
DNA (807bp) protein (269aa)
Putative decarboxylase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QKC2_BORBO
decarboxylase
Asp/Glu/Hydantoin racemase {ECO:0000313|EMBL:KDD59486.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchi
SCNpilot_expt_300_bf_scaffold_473_27
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29699..30640
DNA (942bp) protein (314aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1L7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM30109.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotonon
LysR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_473_28
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30679..31911
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V5CGI6_RALSL rbh
RSp1583; hypothetical protein
Probable o-acetylhomoserine sulfhydrylase transmembrane protein {ECO:0000313|EMBL:CAD18734.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ra
SCNpilot_expt_300_bf_scaffold_473_29
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(31908..33569)
DNA (1662bp) protein (554aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VQ37_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIJ83655.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
PAS/PAC sensor hybrid histidine kinase
SCNpilot_expt_300_bf_scaffold_473_30
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33656..34066
DNA (411bp) protein (137aa)
Ferredoxin n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XYE0_ALCXX
Ferredoxin
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:KCV65821.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sou
Displaying items 1-30 of 112 in total

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