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SCNpilot_expt_300_bf_scaffold_477

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Displaying items 1-30 of 89 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_477_1
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..520
DNA (519bp) protein (173aa)
Inner membrane transport protein YajR n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HRP2_ACHXA
Membrane protein {ECO:0000313|EMBL:KGY27782.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xy
inner membrane transporter YajR
SCNpilot_expt_300_bf_scaffold_477_2
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

681..914
DNA (234bp) protein (78aa)
Single-stranded DNA-binding protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UH71_ADVKW
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1036672 species="Bacteria; Proteobacteria; Bet
SCNpilot_expt_300_bf_scaffold_477_3
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

853..1122
DNA (270bp) protein (90aa)
Single-stranded DNA-binding protein n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=SSB_BORPA
ssb; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000255|HAMAP-Rule:MF_00984}; Short=SSB {ECO:0000255|HAMAP-Rule:MF_00984};; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
SCNpilot_expt_300_bf_scaffold_477_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1144..1542
DNA (399bp) protein (133aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFV2_RHITR
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_300_bf_scaffold_477_5
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1615..1944
DNA (330bp) protein (110aa)
Arsenical resistance transcriptional regulator, arsR n=3 Tax=Proteobacteria RepID=A4G6H6_HERAR
arsR(3); ArsR family transcriptional regulator
Arsenical resistance transcriptional regulator, arsR {ECO:0000313|EMBL:CAL62113.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas
SCNpilot_expt_300_bf_scaffold_477_6
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1941..3011
DNA (1071bp) protein (357aa)
ACR3 family arsenite transporter n=2 Tax=Burkholderia multivorans RepID=A9AE94_BURM1
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:EJO56667.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia co
SCNpilot_expt_300_bf_scaffold_477_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3008..3430
DNA (423bp) protein (141aa)
Arsenate reductase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z3Y6_9RHOO
Arsenate reductase {ECO:0000313|EMBL:GAO22447.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.
arsenate reductase
SCNpilot_expt_300_bf_scaffold_477_8
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3446..3778)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E971F4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC44731.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchar
SCNpilot_expt_300_bf_scaffold_477_9
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3798..4181)
DNA (384bp) protein (128aa)
Putative fluoride ion transporter CrcB n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HZ43_PSEUO
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
camphor resistance protein CrcB
SCNpilot_expt_300_bf_scaffold_477_10
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4475..5962
DNA (1488bp) protein (496aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
amn; AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHX9_ACHXA rbh
SCNpilot_expt_300_bf_scaffold_477_11
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6024..7583
DNA (1560bp) protein (520aa)
Aminoglycoside response regulator n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V3S1_PSEA7 rbh
Rtn protein
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24507.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
SCNpilot_expt_300_bf_scaffold_477_12
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7628..8833
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YUX9_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:KIG01419.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. M
major Facilitator Superfamily protein
SCNpilot_expt_300_bf_scaffold_477_13
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8944..10062
DNA (1119bp) protein (373aa)
glycosyl transferase family 1 n=1 Tax=Pseudomonas chlororaphis RepID=UPI00031AF196
glycosyl transferase family 1
Glycosyl transferase family 1 {ECO:0000313|EMBL:AIC22915.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
SCNpilot_expt_300_bf_scaffold_477_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10090..11238)
DNA (1149bp) protein (383aa)
h16_A2898; glycosyltransferase (EC:2.4.-.-)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DXY0_9BURK rbh
Mannosyltransferase {ECO:0000313|EMBL:KGF80389.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
SCNpilot_expt_300_bf_scaffold_477_15
unknown

Not on your lists

11334..11573
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_477_16
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11536..12645)
DNA (1110bp) protein (370aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
two component sensor histidine kinase (EC:2.7.3.-)
Signal transduction histidine kinase n=1 Tax=Ralstonia pickettii OR214 RepID=R0DSW3_RALPI
SCNpilot_expt_300_bf_scaffold_477_17
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12973..15006
DNA (2034bp) protein (678aa)
Methyl-accepting chemotaxis protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHB1_AZOSU rbh
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AEV26256.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" sou
SCNpilot_expt_300_bf_scaffold_477_18
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15220..16497
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HQH9_ACHXA rbh
Membrane protein {ECO:0000313|EMBL:KGY27803.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xy
hypothetical protein
SCNpilot_expt_300_bf_scaffold_477_19
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16662..17006
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TJ30_BORBO
Zinc ribbon domain protein {ECO:0000313|EMBL:KCB35171.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii
hypothetical protein
SCNpilot_expt_300_bf_scaffold_477_20
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17044..17643
DNA (600bp) protein (200aa)
Transporter n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XNK0_ALCXX rbh
membrane protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CKI24770.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligene
SCNpilot_expt_300_bf_scaffold_477_21
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17720..19519
DNA (1800bp) protein (600aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AEI16483.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AEI16483.1};; TaxID=94624 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Bordetella petrii RepID=I1SZ75_9BORD rbh
SCNpilot_expt_300_bf_scaffold_477_22
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19618..20241)
DNA (624bp) protein (208aa)
Transcriptional regulator n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HA60_PSEAC rbh
Transcriptional regulator {ECO:0000313|EMBL:KHA78734.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
HTH domain protein
SCNpilot_expt_300_bf_scaffold_477_23
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20416..21522
DNA (1107bp) protein (369aa)
RND transporter MFP subunit n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002E5D8E4 rbh
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CDG80842.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;"
SCNpilot_expt_300_bf_scaffold_477_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22058..24538
DNA (2481bp) protein (827aa)
Probable RND efflux transporter n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6UZP2_PSEA7
Probable RND efflux transporter {ECO:0000313|EMBL:ABR82316.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
RND efflux transporter
SCNpilot_expt_300_bf_scaffold_477_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24549..25961
DNA (1413bp) protein (471aa)
Outer membrane protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6UZP1_PSEA7 rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:ABR86275.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin
SCNpilot_expt_300_bf_scaffold_477_26
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25958..27367
DNA (1410bp) protein (470aa)
MFS transporter n=1 Tax=Pseudomonas sp. HYS RepID=UPI00029B13C3 rbh
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIL62132.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
SCNpilot_expt_300_bf_scaffold_477_27
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27378..27806)
DNA (429bp) protein (143aa)
glyoxalase n=1 Tax=Pseudomonas geniculata RepID=UPI000299D82E
glyoxalase
Glyoxalase family protein {ECO:0000313|EMBL:EED39854.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotropho
SCNpilot_expt_300_bf_scaffold_477_28
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27885..28766)
DNA (882bp) protein (294aa)
LysR family transcriptional regulator n=1 Tax=Cupriavidus sp. WS RepID=UPI00036AE16D rbh
LysR family transcriptional regulator
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22100.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
SCNpilot_expt_300_bf_scaffold_477_29
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28894..29316
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00030A5640
dioxygenase/Glyoxalase, bleomycin resistance protein
Dioxygenase/Glyoxalase, bleomycin resistance protein {ECO:0000313|EMBL:EKZ98840.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.
SCNpilot_expt_300_bf_scaffold_477_30
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29367..29735
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFD5_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66728.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrop
Displaying items 1-30 of 89 in total

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