ggKbase home page

SCNpilot_expt_300_bf_scaffold_694

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_694_1
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2608)
DNA (2607bp) protein (869aa)
DNA polymerase I n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F908_9BURK rbh
DNA polymerase I {ECO:0000313|EMBL:KGD85651.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
DNA polymerase I
SCNpilot_expt_300_bf_scaffold_694_2
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2628..3443
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTT7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDM82433.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED
Rossmann fold nucleotide-binding protein
SCNpilot_expt_300_bf_scaffold_694_3
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3487..4497
DNA (1011bp) protein (337aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FAC1_9BURK rbh
SCNpilot_expt_300_bf_scaffold_694_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4575..5360
DNA (786bp) protein (262aa)
Putative membrane protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IT68_BORPD rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAP43388.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (s
SCNpilot_expt_300_bf_scaffold_694_5
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5608..5811
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000373B56D
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADG16832.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
SCNpilot_expt_300_bf_scaffold_694_6
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6092..6361
DNA (270bp) protein (90aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=12493149 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
translation initiation factor IF-1
SCNpilot_expt_300_bf_scaffold_694_7
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6363..6851
DNA (489bp) protein (163aa)
DNA damage-inducible protein n=4 Tax=Pseudomonas aeruginosa RepID=U5ADZ5_PSEAI
Damage-inducible protein {ECO:0000313|EMBL:KJV33459.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.
putative DNA damage-inducible gene
SCNpilot_expt_300_bf_scaffold_694_8
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6858..9086)
DNA (2229bp) protein (743aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achrom
DNA helicase II n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7TAG5_ALCXX rbh
DNA helicase
SCNpilot_expt_300_bf_scaffold_694_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9433..11892
DNA (2460bp) protein (820aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1331202 species="Bacteria; Proteo
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Bordetella sp. FB-8 RepID=UPI000368399A rbh
SCNpilot_expt_300_bf_scaffold_694_10
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12069..12563
DNA (495bp) protein (165aa)
Rare lipoprotein B n=2 Tax=Cupriavidus RepID=Q1LJ31_RALME
h16_A3138; rare lipoprotein B precursor; K03643 LPS-assembly lipoprotein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
rlpB; rare lipoprotein B
SCNpilot_expt_300_bf_scaffold_694_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12715..13749
DNA (1035bp) protein (345aa)
Putative DNA polymerase III, delta subunit {ECO:0000313|EMBL:CCN22574.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CCN22574.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
Putative DNA polymerase III, delta subunit n=5 Tax=Bordetella RepID=K0MC64_BORPB rbh
holA; DNA polymerase III subunit delta
SCNpilot_expt_300_bf_scaffold_694_12
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13805..15043
DNA (1239bp) protein (413aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
Gamma-glutamyl phosphate reductase n=2 Tax=Bordetella bronchiseptica RepID=K4QIA5_BORBO rbh
SCNpilot_expt_300_bf_scaffold_694_13
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15144..15566
DNA (423bp) protein (141aa)
membrane protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036A95B6
membrane protein
Membrane protein {ECO:0000313|EMBL:EYS96394.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
SCNpilot_expt_300_bf_scaffold_694_14
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15918..17051
DNA (1134bp) protein (378aa)
N-6 adenine-specific DNA methylase 1 (EC:2.1.1.72)
Putative N6-adenine-specific DNA methylase (Fragment) n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T3M6_ALCXX rbh
Putative N6-adenine-specific DNA methylase {ECO:0000313|EMBL:EGP45089.1}; Flags: Fragment;; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achrom
SCNpilot_expt_300_bf_scaffold_694_15
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17098..17751)
DNA (654bp) protein (218aa)
PPOX class probable FMN-dependent enzyme, DR_2398 family n=1 Tax=Acidovorax sp. CF316 RepID=J1EG06_9BURK rbh
PPOX class probable FMN-dependent enzyme, DR_2398 family {ECO:0000313|EMBL:EJE51179.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax
FMN-binding pyridoxamine 5'-phosphate oxidase-like protein
SCNpilot_expt_300_bf_scaffold_694_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17843..18631
DNA (789bp) protein (263aa)
Transcriptional regulator, AraC family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ASN3_DELSC rbh
AraC family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD38232.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_expt_300_bf_scaffold_694_17
unknown

Not on your lists

18808..18999
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_694_18
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19140..20594)
DNA (1455bp) protein (485aa)
Outer membrane efflux protein n=1 Tax=Ralstonia sp. PBA RepID=I9BZR9_9RALS rbh
Outer membrane efflux protein {ECO:0000313|EMBL:EIZ05186.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. P
cusC; outer membrane lipoprotein
SCNpilot_expt_300_bf_scaffold_694_19
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20596..23112)
DNA (2517bp) protein (839aa)
acriflavine resistance protein B n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031C8CC9
Acriflavine resistance protein B {ECO:0000313|EMBL:KIF81786.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbasp
cmeB; RND efflux system
Displaying 19 items

View Taxonomy