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SCNpilot_expt_300_bf_scaffold_731

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_731_1
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..460)
DNA (459bp) protein (153aa)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XT65_ALCXX
CBS
CBS {ECO:0000313|EMBL:AIR50963.1}; Uncharacterized protein {ECO:0000313|EMBL:EFV83833.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromoba
SCNpilot_expt_300_bf_scaffold_731_2
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(570..1289)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000308CD35
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAP43767.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
SCNpilot_expt_300_bf_scaffold_731_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1405..2940
DNA (1536bp) protein (512aa)
Putative esterase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HVC0_AZOC5
esterase
Putative esterase {ECO:0000313|EMBL:BAF90297.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (
SCNpilot_expt_300_bf_scaffold_731_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3034..4191
DNA (1158bp) protein (386aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TGG3_TISMK
amidohydrolase; K07045 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
SCNpilot_expt_300_bf_scaffold_731_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4282..4521
DNA (240bp) protein (80aa)
extra-cytoplasmic solute receptor family protein 101 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_300_bf_scaffold_731_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4518..5207
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W8U2_9RALS
extra-cytoplasmic solute receptor family protein 101 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_731_7
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5227..6219
DNA (993bp) protein (331aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
4,5-dihydroxyphthalate decarboxylase {ECO:0000313|EMBL:CCN21177.1}; EC=4.1.1.55 {ECO:0000313|EMBL:CCN21177.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Al
4,5-dihydroxyphthalate decarboxylase n=3 Tax=Bordetella bronchiseptica RepID=K4QMK6_BORBO
SCNpilot_expt_300_bf_scaffold_731_8
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6216..7079
DNA (864bp) protein (288aa)
Putative esterase n=4 Tax=Bordetella RepID=K0MK72_BORPB
esterase
Putative esterase {ECO:0000313|EMBL:CCJ51357.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (s
SCNpilot_expt_300_bf_scaffold_731_9
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7097..8260
DNA (1164bp) protein (388aa)
ABC transporter substrate binding protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SG97_9BURK
ABC transporter substrate binding protein {ECO:0000313|EMBL:EHP38435.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="
extracellular ligand-binding receptor
SCNpilot_expt_300_bf_scaffold_731_10
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8275..9156
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FCB073 rbh
putative transmembrane abc transporter protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
inner-membrane translocator
SCNpilot_expt_300_bf_scaffold_731_11
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9153..10139
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D8D87F
ABC transporter permease {ECO:0000313|EMBL:KJK21931.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.
Branched-chain amino acid transport system permease protein LivM
SCNpilot_expt_300_bf_scaffold_731_12
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10136..10894
DNA (759bp) protein (253aa)
Amino-acid ATP-binding ABC transporter protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6FZX2_RALS8
amino-acid ATP-binding ABC transporter protein
Amino-acid ATP-binding ABC transporter protein {ECO:0000313|EMBL:AEG68484.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" sourc
SCNpilot_expt_300_bf_scaffold_731_13
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10885..11637
DNA (753bp) protein (251aa)
ABC transporter related protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQM9_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYC49712.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemone
ABC transporter
SCNpilot_expt_300_bf_scaffold_731_14
Pusillimonas noertemannii, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11672..11977
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003087BC3
SCNpilot_expt_300_bf_scaffold_731_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11991..12839
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FBBB7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87560.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
SCNpilot_expt_300_bf_scaffold_731_16
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12880..14331)
DNA (1452bp) protein (484aa)
UPF0761 membrane protein Bpet3042 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=Y3042_BORPD rbh
ribonuclease
UPF0761 membrane protein Bpet3042 {ECO:0000255|HAMAP-Rule:MF_00672}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel
SCNpilot_expt_300_bf_scaffold_731_17
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14353..14895
DNA (543bp) protein (181aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|SAAS:SAAS00064138};; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ch
NAD(P)H quinone oxidoreductase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000371AC9E
flavoprotein WrbA
SCNpilot_expt_300_bf_scaffold_731_18
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14892..15296
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XT28_ALCXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH07776.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
SCNpilot_expt_300_bf_scaffold_731_19
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15322..16722
DNA (1401bp) protein (467aa)
D-2-hydroxyglutarate dehydrogenase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XUT3_ALCXX
D-2-hydroxyglutarate dehydrogenase
D-2-hydroxyglutarate dehydrogenase {ECO:0000313|EMBL:CCH06922.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromo
SCNpilot_expt_300_bf_scaffold_731_20
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16736..17635)
DNA (900bp) protein (300aa)
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZ02_9PROT rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EHM01720.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobactera
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_731_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17744..18604
DNA (861bp) protein (287aa)
Alpha-ketoglutarate-dependent taurine dioxygenase (EC:1.14.11.17)
Taurine catabolism dioxygenase n=1 Tax=Pseudomonas aeruginosa BWHPSA020 RepID=U8S670_PSEAI
Taurine dioxygenase {ECO:0000313|EMBL:AKE69872.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_300_bf_scaffold_731_22
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

18588..19376
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Desulfovibrio africanus RepID=F3Z1U8_DESAF id=5225489 bin=16ft_combo_ws3_JS1 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein; K07081 Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
mqnA; futalosine synthase
SCNpilot_expt_300_bf_scaffold_731_23
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19420..20427
DNA (1008bp) protein (336aa)
extracytoplasmic binding receptor n=1 Tax=Variovorax paradoxus RepID=UPI000365A8C0
Uncharacterized protein {ECO:0000313|EMBL:KGJ23217.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 550
ABC transporter substrate-binding protein
SCNpilot_expt_300_bf_scaffold_731_24
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20459..20836)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4QX29_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGD94183.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
hypothetical protein
SCNpilot_expt_300_bf_scaffold_731_25
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20959..21924
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase n=35 Tax=Bordetella RepID=F4LFP0_BORPC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE41383.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (
SCNpilot_expt_300_bf_scaffold_731_26
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22041..22679
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUM7_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26301.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_300_bf_scaffold_731_27
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22741..23607
DNA (867bp) protein (289aa)
Short-chain dehydrogenase family protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PSM7_9RHOO rbh
short-chain dehydrogenase family protein
Short-chain dehydrogenase family protein {ECO:0000313|EMBL:BAL24969.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus
SCNpilot_expt_300_bf_scaffold_731_28
unknown

Not on your lists

comp(23597..23917)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_731_29
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24117..24794
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCM8_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93317.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
SCNpilot_expt_300_bf_scaffold_731_30
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24791..26020)
DNA (1230bp) protein (410aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUD0_JANMA rbh
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR90280.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Jan
Displaying items 1-30 of 47 in total

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