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SCNpilot_expt_300_bf_scaffold_1112_10

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_67_13

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(7436..8605)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor 6 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXR8_ACHXA similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 391.0
  • Bit_score: 478
  • Evalue 4.70e-132
periplasmic binding domain protein similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 387.0
  • Bit_score: 483
  • Evalue 5.40e-134
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGH10165.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 387.0
  • Bit_score: 483
  • Evalue 2.70e-133

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGCCCCTGAAAGCCCTTCCGGCCGCCGCGCTGCTGGCCGCCGCCTGTACCCTGCCCGCCTTCGCCCAGACGCCCGTCAAGATCGGGTTCCTGGGCGAGTTCTCCGGCCCCCAGGCCGGCCTCGGCCAGGACATGTACGACGGCTTCATGCTGGGCATCCGGCAGGCCGGCGGCAAACTGGGCGGCGTCCCCGTGGAAGTGCTGCGGGAGGACACGCAGCTCAAGCCCGACGTGGCGGTCCAGGTCGCGCGCAAGCTGATCGAGAAGGAGAAGGTGCCCATCATCGCCGGCATTACGTTCTCGAACATCATGATGTCGGTACAGCCGCTGGCCACGCGGCGCGAGGTCTTCGTCATCGGCACCAACGCCGGGCCTTCGCCGATCGCCGGCGACAAGTGCTCGCCCTACCAGTTCATCGTGTCGCGCCAGGGCGACCAGCAGGCCGAGGTGCTGGGCAAGTACGCGACCCAGCGGGGCTACCAGCGCGTCGTGATGATGGCGCCCAACTACCAGGCGGGCAAGGACGTGCTGGCCGGTTTCCGGCGCTATTTCAAGAACGAGGTCGTGGAGGAGATCCATACGCCGCTCGACCAGTTCGACTTCTCGGCCGAGCTGTCGCGCGTCGCGGCCCACAAACCCGATGCCGTCTTTGCGTTCTACCCCGGCAGCCCAGGCGTGAACTTCGTCCGCCAGTACCGCCAGTTGGGGCTGGCCGAGCGCACCCCGCTGATGTCCGTCGCGGTGGTCGACGGCGTGTCGCTGCCCGCGCTGCGCGAAGCGGCGTTGGGCGTCCTGCTGGGCAGCACCTGGGGCCCCGACCTGCCGGCCGAGGCGAACCGCCGCTTCGTGTCCGCCTTCGAAGCCGCCTATGGCCGCACCCCGTCGGAATACGCCGCCACCAGCTACGACGCGGCCCGGCTGCTGGATGCAGCGATCGGCGCGGTCAAGGGCAACGTCGCGGACAAGCCCGCCTTCATGGCGGCGCTGAAGGCGGCCCGCTTCGACTCGGTGCGCGGCAACTTCAAGTTCGGCAACAACCATTTCCCCATCCAGGACCTGCACGTGTTCCAGGTCGTGCGCGATGGCGAAAACCAGGTCGCCCTCAAGACGGTGGAAACCCCGATGAAGGGCGTCCAGGACGCCTATCACGATGGATGTACCATGCGTTGA
PROTEIN sequence
Length: 390
MPLKALPAAALLAAACTLPAFAQTPVKIGFLGEFSGPQAGLGQDMYDGFMLGIRQAGGKLGGVPVEVLREDTQLKPDVAVQVARKLIEKEKVPIIAGITFSNIMMSVQPLATRREVFVIGTNAGPSPIAGDKCSPYQFIVSRQGDQQAEVLGKYATQRGYQRVVMMAPNYQAGKDVLAGFRRYFKNEVVEEIHTPLDQFDFSAELSRVAAHKPDAVFAFYPGSPGVNFVRQYRQLGLAERTPLMSVAVVDGVSLPALREAALGVLLGSTWGPDLPAEANRRFVSAFEAAYGRTPSEYAATSYDAARLLDAAIGAVKGNVADKPAFMAALKAARFDSVRGNFKFGNNHFPIQDLHVFQVVRDGENQVALKTVETPMKGVQDAYHDGCTMR*