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SCNpilot_expt_300_bf_scaffold_1495

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1495_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..490)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADP2_9MICO
Exonuclease {ECO:0000313|EMBL:KIC59353.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
exonuclease III
SCNpilot_expt_300_bf_scaffold_1495_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(557..1390)
DNA (834bp) protein (278aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4Z1_9MICO
truA; pseudouridylate synthase
SCNpilot_expt_300_bf_scaffold_1495_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1421..2437)
DNA (1017bp) protein (339aa)
fructokinase (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCR8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86439.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
SCNpilot_expt_300_bf_scaffold_1495_4
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2532..4676
DNA (2145bp) protein (715aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003695799 rbh
Acyltransferase 3 {ECO:0000313|EMBL:EZP29015.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
acyltransferase
SCNpilot_expt_300_bf_scaffold_1495_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4683..5813)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADP7_9MICO rbh
Acetyltransferase {ECO:0000313|EMBL:KIC59349.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
N-acetyltransferase
SCNpilot_expt_300_bf_scaffold_1495_6
Bipolaris zeicola, Bipolaris, Pleosporales, Pleosporomycetidae, Ascomycota, Fungi

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comp(6121..6432)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:EUC38156.1}; TaxID=930089 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pl
SCNpilot_expt_300_bf_scaffold_1495_7
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6642..7418)
DNA (777bp) protein (259aa)
Transposase of ISAar43, IS3 family, IS407 group, orfB n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VZR8_ARTAR rbh
transposase of ISAar43, IS3 family, IS407 group, orfB
Transposase of ISAar43, IS3 family, IS407 group, orfB {ECO:0000313|EMBL:CBT77121.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter
SCNpilot_expt_300_bf_scaffold_1495_8
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7481..7765)
DNA (285bp) protein (95aa)
transposase IS3 n=1 Tax=Agromyces italicus RepID=UPI0003B3A3A2
Transposase {ECO:0000313|EMBL:EKU45029.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
Transposase
SCNpilot_expt_300_bf_scaffold_1495_9
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7917..8168
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003475B09
Transposase {ECO:0000313|EMBL:EME62723.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
ATP-binding protein
SCNpilot_expt_300_bf_scaffold_1495_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8352..8642
DNA (291bp) protein (97aa)
Integrase catalytic region n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8EA11_9MICO
Integrase core domain protein {ECO:0000313|EMBL:KJL37372.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
integrase
SCNpilot_expt_300_bf_scaffold_1495_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8670..8915
DNA (246bp) protein (82aa)
Integrase catalytic region n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8EA11_9MICO
Integrase catalytic region {ECO:0000313|EMBL:EIC06235.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR2
ABC-type phosphate transport system, ATPase component
Displaying 11 items

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