ggKbase home page

SCNpilot_expt_300_bf_scaffold_3228

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_3228_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..360
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7U0Q4_PSEME
Acetylserine transporter {ECO:0000313|EMBL:KKB78981.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3228_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

360..1241
DNA (882bp) protein (294aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6E6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07727.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
permease of the drug/metabolite transporter (DMT) superfamily
SCNpilot_expt_300_bf_scaffold_3228_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1298..1573)
DNA (276bp) protein (92aa)
calcium-binding EF-hand
Uncharacterized protein {ECO:0000313|EMBL:KKB08303.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_300_bf_scaffold_3228_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1734..1982)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDK7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30215.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3228_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2344..2982)
DNA (639bp) protein (213aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
Carbonic anhydrase n=1 Tax=Rhizobium sp. RepID=L0NKA1_RHISP rbh
carbonate dehydratase
SCNpilot_expt_300_bf_scaffold_3228_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3055..3261
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30213.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3228_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3289..3723)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QS32_9RHIZ
Ubiquinol-cytochrome C reductase {ECO:0000313|EMBL:KKB78846.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3228_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3727..3954)
DNA (228bp) protein (76aa)
Hypothetical Cytosolic Protein, YCII-related protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q140E9_BURXL
Uncharacterized protein {ECO:0000313|EMBL:KKB07747.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
YCII-related domain protein
SCNpilot_expt_300_bf_scaffold_3228_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4022..5008)
DNA (987bp) protein (329aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6U7_PELHB rbh
glycerol-3-phosphate dehydrogenase (NAD(P)+)
SCNpilot_expt_300_bf_scaffold_3228_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4998..6098)
DNA (1101bp) protein (367aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6U8_PELHB
YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA
SCNpilot_expt_300_bf_scaffold_3228_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6135..7073
DNA (939bp) protein (313aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLF1_9RHIZ
SCNpilot_expt_300_bf_scaffold_3228_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7061..7753
DNA (693bp) protein (231aa)
Uroporphyrinogen-III synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6V0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07751.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
uroporphyrinogen-III synthase
Displaying 12 items

View Taxonomy