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SCNpilot_expt_300_bf_scaffold_1502

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1502_1

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2..391
DNA (390bp) protein (130aa)
PilT protein n=1 Tax=mine drainage metagenome RepID=T0ZPP9_9ZZZZ
PilT protein {ECO:0000313|EMBL:EQD46482.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
stbB; plasmid stability protein StbB
SCNpilot_expt_300_bf_scaffold_1502_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(388..684)
DNA (297bp) protein (99aa)
Phage DNA packaging protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE00_PELHB
ATP-binding protein {ECO:0000313|EMBL:KKB10226.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage DNA packaging protein
SCNpilot_expt_300_bf_scaffold_1502_3
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1517..2008
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VE11_RHOPX
Uncharacterized protein {ECO:0000313|EMBL:KKC33989.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1502_4
unknown

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comp(2005..2463)
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1502_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2593..4758)
DNA (2166bp) protein (722aa)
Multimodular transpeptidase-transglycosylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCK5_PELHB rbh
Penicillin-binding protein {ECO:0000313|EMBL:KKB10224.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;
multimodular transpeptidase-transglycosylase
SCNpilot_expt_300_bf_scaffold_1502_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4892..5347
DNA (456bp) protein (152aa)
UPF0260 protein KKY_639 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCK6_PELHB
UPF0260 protein VW35_16560 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1502_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5515..6147
DNA (633bp) protein (211aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GMD5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKB09029.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
PleD-related family two-component system response regulator
SCNpilot_expt_300_bf_scaffold_1502_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6647..7054
DNA (408bp) protein (136aa)
DnaK-type molecular chaperone DnaK n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEF5_9RHIZ
Heat-shock protein {ECO:0000313|EMBL:KFL29368.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DnaK-type molecular chaperone DnaK
Displaying 8 items

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