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SCNpilot_expt_300_bf_scaffold_1510

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1510_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..287)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB84878.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
SCNpilot_expt_300_bf_scaffold_1510_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(296..1180)
DNA (885bp) protein (295aa)
Phenazine biosynthesis protein PhzF like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REW1_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB09953.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phenazine biosynthesis protein PhzF like protein
SCNpilot_expt_300_bf_scaffold_1510_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1177..1674)
DNA (498bp) protein (166aa)
UPI0003CEA14B related cluster n=1 Tax=unknown RepID=UPI0003CEA14B
UPF0303 protein VW35_05550 {ECO:0000256|HAMAP-Rule:MF_00761}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1510_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1674..2141)
DNA (468bp) protein (156aa)
aldehyde-activating protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI00037A9BFE
Uncharacterized protein {ECO:0000313|EMBL:KKB09955.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glutathione-dependent formaldehyde-activating protein
SCNpilot_expt_300_bf_scaffold_1510_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2258..3280)
DNA (1023bp) protein (341aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
Ketol-acid reductoisomerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REW7_PELHB rbh
ketol-acid reductoisomerase
SCNpilot_expt_300_bf_scaffold_1510_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3308..3955)
DNA (648bp) protein (216aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUH2_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:KKB09957.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
transcriptional regulator, TetR family
SCNpilot_expt_300_bf_scaffold_1510_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4121..5092
DNA (972bp) protein (324aa)
Transcription regulator (Contains diacylglycerol kinase catalytic domain) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFV2_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08585.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
transcription regulator (contains diacylglycerol kinase catalytic domain)
SCNpilot_expt_300_bf_scaffold_1510_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5089..5913
DNA (825bp) protein (275aa)
Putative phosphohydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFV3_PELHB rbh
Metallophosphoesterase {ECO:0000313|EMBL:KKB08584.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative phosphohydrolase
SCNpilot_expt_300_bf_scaffold_1510_9
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6041..6208
DNA (168bp) protein (56aa)
pepT; peptidase T (EC:3.4.11.4)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1418105 spec
peptidase T n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037668DF
Displaying 9 items

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