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SCNpilot_expt_300_bf_scaffold_1881

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1881_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..795
DNA (795bp) protein (265aa)
Sarcosine oxidase alpha subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE25_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29349.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sarcosine oxidase alpha subunit
SCNpilot_expt_300_bf_scaffold_1881_2
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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785..1429
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB81271.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sarcosine oxidase alpha subunit
SCNpilot_expt_300_bf_scaffold_1881_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1426..2643)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE24_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB09049.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1881_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2732..3208)
DNA (477bp) protein (159aa)
LipA a lipoprotein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE23_PELHB
LipA a lipoprotein {ECO:0000313|EMBL:KFC71162.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
LipA a lipoprotein
SCNpilot_expt_300_bf_scaffold_1881_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3267..4562)
DNA (1296bp) protein (432aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE22_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB81356.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sensor signal transduction histidine kinase
SCNpilot_expt_300_bf_scaffold_1881_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4607..5266)
DNA (660bp) protein (220aa)
Two-component system response regulator QseB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE21_PELHB rbh
Transcriptional regulator {ECO:0000313|EMBL:KKB09047.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
two-component system response regulator QseB
SCNpilot_expt_300_bf_scaffold_1881_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5290..5589)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE20_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86621.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1881_8
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5834..6082)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3L6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EAU41815.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HT
SCNpilot_expt_300_bf_scaffold_1881_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6137..6877)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE19_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09046.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1881_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6861..9389)
DNA (2529bp) protein (843aa)
Phage Host Specificity protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE17_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29352.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phage Host Specificity protein
SCNpilot_expt_300_bf_scaffold_1881_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9332..10564)
DNA (1233bp) protein (411aa)
Phage Host Specificity protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE17_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB81275.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
phage Host Specificity protein
SCNpilot_expt_300_bf_scaffold_1881_12
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10713..11129)
DNA (417bp) protein (139aa)
NLP/P60 family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE16_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86618.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
NLP/P60 family protein
SCNpilot_expt_300_bf_scaffold_1881_13
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11126..11479)
DNA (354bp) protein (118aa)
FAD/FMN-containing dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE15_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86617.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
FAD/FMN-containing dehydrogenase
Displaying 13 items

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