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SCNpilot_expt_300_bf_scaffold_2093

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2093_1
Vibrio fluvialis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..769)
DNA (768bp) protein (256aa)
Diguanylate cyclase n=1 Tax=Vibrio fluvialis I21563 RepID=S7HY32_VIBFL
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor {ECO:0000313|EMBL:EPP24198.1}; TaxID=1336752 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source=
SCNpilot_expt_300_bf_scaffold_2093_2
unknown

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comp(849..1358)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2093_3
unknown

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1492..1752
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2093_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1759..2373)
DNA (615bp) protein (205aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JRM3_9PROT rbh
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:KKB07528.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhat
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2093_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2490..2894
DNA (405bp) protein (135aa)
Transcriptional regulator, putative n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM07_9RHIZ
Methionine sulfoxide reductase B {ECO:0000313|EMBL:KKB77168.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_2093_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2959..3705)
DNA (747bp) protein (249aa)
demethylmenaquinone methyltransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035F011D rbh
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:KKB77119.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sol
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2093_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3733..4893)
DNA (1161bp) protein (387aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0CAF5_RHILT rbh
Galactonate dehydratase {ECO:0000313|EMBL:KKB77118.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
galactonate dehydratase
SCNpilot_expt_300_bf_scaffold_2093_8
unknown

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comp(4923..4988)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 8 items

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