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SCNpilot_expt_300_bf_scaffold_2481

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2481_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..245
DNA (243bp) protein (81aa)
phosphoesterase n=1 Tax=Methylobacterium RepID=UPI00035D3162
PA-phosphatase related phosphoesterase {ECO:0000313|EMBL:KFC71779.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
phosphoesterase
SCNpilot_expt_300_bf_scaffold_2481_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(262..1143)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003813C6B
Uncharacterized protein {ECO:0000313|EMBL:KFL32748.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2481_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1140..1562)
DNA (423bp) protein (141aa)
Acetyltransferase protein n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3F2T6_KETVY
Acetyltransferase {ECO:0000313|EMBL:KFL32747.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
acetyltransferase protein
SCNpilot_expt_300_bf_scaffold_2481_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1567..2685)
DNA (1119bp) protein (373aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MRJ1_9RHIZ rbh
anhydro-N-acetylmuramic acid kinase
SCNpilot_expt_300_bf_scaffold_2481_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2695..3657)
DNA (963bp) protein (321aa)
UPI0003CE8CF7 related cluster n=1 Tax=unknown RepID=UPI0003CE8CF7
Esterase {ECO:0000313|EMBL:KFL32745.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
beta-lactamase
SCNpilot_expt_300_bf_scaffold_2481_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3654..5384)
DNA (1731bp) protein (577aa)
Peptide ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2NNF5_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL32744.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribofl
ABC transporter ATP-binding protein
SCNpilot_expt_300_bf_scaffold_2481_7
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5381..6223)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitratireductor indicus C115 RepID=K2P0R1_9RHIZ rbh
Diguanylate cyclase {ECO:0000313|EMBL:KKB78529.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
Glutathione ABC transporter, permease protein
SCNpilot_expt_300_bf_scaffold_2481_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6223..7182)
DNA (960bp) protein (320aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J2JMC6_9RHIZ rbh
Glutathione ABC transporter permease {ECO:0000313|EMBL:KFL32742.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribof
Binding-protein-dependent transport system inner membrane component family protein 31
SCNpilot_expt_300_bf_scaffold_2481_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7329..8096)
DNA (768bp) protein (256aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQ90_MESAW
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32741.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
ABC-type dipeptide transport system, periplasmic component
SCNpilot_expt_300_bf_scaffold_2481_10
unknown

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8156..8626
DNA (471bp) protein (157aa)

This feature has no annotations

Displaying 10 items

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