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SCNpilot_expt_300_bf_scaffold_2504

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2504_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(154..303)
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC68108.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCNpilot_expt_300_bf_scaffold_2504_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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689..1888
DNA (1200bp) protein (400aa)
integrase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A23
integrase
Integrase {ECO:0000313|EMBL:AJP70713.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_expt_300_bf_scaffold_2504_3
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1934..2446)
DNA (513bp) protein (171aa)
UPI0003CF6BB7 related cluster n=1 Tax=unknown RepID=UPI0003CF6BB7
Uncharacterized protein {ECO:0000313|EMBL:KKB79664.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2504_4
unknown

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comp(2662..2988)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2504_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3328..4281
DNA (954bp) protein (318aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Rhizobium sp. AP16 RepID=J2LID4_9RHIZ rbh
reverse transcriptase
Uncharacterized protein {ECO:0000313|EMBL:AHK03638.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
SCNpilot_expt_300_bf_scaffold_2504_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4296..5228)
DNA (933bp) protein (311aa)
UPI0003CE90B9 related cluster n=1 Tax=unknown RepID=UPI0003CE90B9 rbh
Restriction endonuclease {ECO:0000313|EMBL:ESY70644.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
restriction endonuclease
SCNpilot_expt_300_bf_scaffold_2504_7
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5238..7850)
DNA (2613bp) protein (871aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FC43F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD56142.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (str
Displaying 7 items

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