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SCNpilot_expt_300_bf_scaffold_12924

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_12924_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..371
DNA (369bp) protein (123aa)
Putative aminopeptidase n=1 Tax=Rhizobium sp. CF080 RepID=J2KEA3_9RHIZ
Peptidase M28 {ECO:0000313|EMBL:KFL29585.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Predicted aminopeptidases
SCNpilot_expt_300_bf_scaffold_12924_2
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(485..1018)
DNA (534bp) protein (178aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteoba
sn-glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI00036FF3AC
glycerol-3-phosphate ABC transporter ATP-binding protein
SCNpilot_expt_300_bf_scaffold_12924_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1015..1536)
DNA (522bp) protein (174aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteoba
SN-glycerol-3-phosphate transport ATP-binding protein UgpC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY5_PELHB
SN-glycerol-3-phosphate transport ATP-binding protein UgpC
SCNpilot_expt_300_bf_scaffold_12924_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1536..2267)
DNA (732bp) protein (244aa)
Protein tyrosine/serine phosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY4_PELHB
Protein tyrosine phosphatase {ECO:0000313|EMBL:KKB80367.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
protein tyrosine/serine phosphatase
SCNpilot_expt_300_bf_scaffold_12924_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2267..3076)
DNA (810bp) protein (270aa)
Putative sugar ABC transporter permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY3_PELHB
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL31060.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina
putative sugar ABC transporter permease
SCNpilot_expt_300_bf_scaffold_12924_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3099..4019)
DNA (921bp) protein (307aa)
SN-glycerol-3-phosphate transport system permease protein UgpA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY2_PELHB
Glycerol-3-phosphate ABC transporter permease {ECO:0000313|EMBL:KFL31059.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
SN-glycerol-3-phosphate transport system permease protein UgpA
SCNpilot_expt_300_bf_scaffold_12924_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4082..4213)
DNA (132bp) protein (44aa)
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY0_PELHB
Glycerol-3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB12298.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devos
glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein
SCNpilot_expt_300_bf_scaffold_12924_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4174..5328)
DNA (1155bp) protein (385aa)
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY0_PELHB
Glycerol-3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB80364.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devos
glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein
SCNpilot_expt_300_bf_scaffold_12924_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5354..5755)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3P2_9RHIZ
Phosphohydrolase {ECO:0000313|EMBL:KKB80363.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
3',5'-cyclic-nucleotide phosphodiesterase
SCNpilot_expt_300_bf_scaffold_12924_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5733..6182)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U7H8_RHIRD
Phosphohydrolase {ECO:0000313|EMBL:KKB80363.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative phosphohydrolase
SCNpilot_expt_300_bf_scaffold_12924_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6328..6897
DNA (570bp) protein (190aa)
Putative TetR-family transcriptional regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCX8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB80362.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative TetR-family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_12924_12
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6894..7517)
DNA (624bp) protein (208aa)
Sulphate transporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIX0_9PROT
Sulfate transporter {ECO:0000313|EMBL:KKC34952.1}; Flags: Fragment;; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psy
sulfate transporter
Displaying 12 items

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