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SCNPILOT_EXPT_300_BF_Rhizobiales_67_5

SCNPILOT_EXPT_300_BF_Bosea_sp__LC85_67_4
In projects: SCNPILOT_EXPT_300_BF

Consensus taxonomy: Bosea sp. LC85  →  Bosea  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

from comparison: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

Displaying items 301-350 of 431 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_300_bf_scaffold_22247
Species: Xanthomonas translucens (50%)
2 1335 bp 66.07 3.57 100.45
SCNpilot_expt_300_bf_scaffold_22761
Species: Burkholderia andropogonis (50%)
2 1313 bp 62.45 3.25 70.37
SCNpilot_expt_300_bf_scaffold_25809
Species: Bosea sp. LC85 (100%)
2 1186 bp 64.50 5.08 78.92
SCNpilot_expt_300_bf_scaffold_17108
Species: Bosea sp. LC85 (100%)
2 1591 bp 68.20 3.63 87.68
SCNpilot_expt_300_bf_scaffold_13525
Species: Bosea sp. LC85 (100%)
2 1839 bp 69.55 3.69 98.04
SCNpilot_expt_300_bf_scaffold_19589
Species: Bosea sp. LC85 (100%)
2 1460 bp 67.33 3.27 87.95
SCNpilot_expt_300_bf_scaffold_22768
Species: Bosea sp. LC85 (100%)
2 1313 bp 68.85 3.06 98.02
SCNpilot_expt_300_bf_scaffold_23656
Species: Azospirillum brasilense (50%)
2 1277 bp 69.30 3.93 90.92
SCNpilot_expt_300_bf_scaffold_12441
Species: Bosea sp. LC85 (100%)
2 1933 bp 64.25 4.67 71.24
SCNpilot_expt_300_bf_scaffold_23146
Species: Bosea sp. LC85 (100%)
2 1298 bp 66.10 4.06 96.38
SCNpilot_expt_300_bf_scaffold_32159
Species: Bosea sp. LC85 (100%)
2 1846 bp 57.48 3.54 83.69
SCNpilot_expt_300_bf_scaffold_29593
Species: Bosea sp. LC85 (100%)
2 1021 bp 66.41 4.67 100.20
SCNpilot_expt_300_bf_scaffold_20403
Species: Bosea sp. LC85 (100%)
2 1419 bp 70.61 3.36 91.12
SCNpilot_expt_300_bf_scaffold_16755
Species: Bradyrhizobium japonicum (50%)
2 1612 bp 65.07 4.83 96.40
SCNpilot_expt_300_bf_scaffold_18876
Species: Bosea sp. LC85 (100%)
2 1496 bp 71.59 5.70 97.46
SCNpilot_expt_300_bf_scaffold_21486
Species: Rhizobium sp. CF142 (50%)
2 1368 bp 67.18 2.39 94.52
SCNpilot_expt_300_bf_scaffold_9246
Species: Bosea sp. LC85 (100%)
2 2298 bp 67.15 5.02 90.34
SCNpilot_expt_300_bf_scaffold_17131
Species: Bradyrhizobium oligotrophicum (50%)
2 1590 bp 68.24 4.26 95.09
SCNpilot_expt_300_bf_scaffold_23420
Species: Bosea sp. LC85 (50%)
2 1286 bp 67.11 5.07 77.92
SCNpilot_expt_300_bf_scaffold_27654
Species: Bosea sp. LC85 (100%)
2 1102 bp 70.33 2.96 99.64
SCNpilot_expt_300_bf_scaffold_16511
Species: Rhizobium freirei (50%)
2 1625 bp 67.75 5.10 92.86
SCNpilot_expt_300_bf_scaffold_27143
Species: Bosea sp. LC85 (100%)
2 1124 bp 68.15 4.02 101.16
SCNpilot_expt_300_bf_scaffold_23425
Species: Ensifer adhaerens (50%)
2 1286 bp 67.42 4.10 98.68
SCNpilot_expt_300_bf_scaffold_26487
Species: Agrobacterium rhizogenes (50%)
2 1155 bp 66.67 2.83 97.66
SCNpilot_expt_300_bf_scaffold_26999
Species: Bosea sp. LC85 (100%)
2 1131 bp 70.82 5.55 94.96
SCNpilot_expt_300_bf_scaffold_29867
Species: Bradyrhizobium sp. ORS 278 (50%)
2 1009 bp 69.47 3.73 85.03
SCNpilot_expt_300_bf_scaffold_22540
Species: Bosea sp. LC85 (100%)
2 1322 bp 66.57 5.51 67.62
SCNpilot_expt_300_bf_scaffold_22286
Species: Bosea sp. LC85 (100%)
2 1333 bp 69.02 3.77 92.05
SCNpilot_expt_300_bf_scaffold_17655
Species: Bosea sp. LC85 (100%)
2 1561 bp 65.86 3.70 99.17
SCNpilot_expt_300_bf_scaffold_6705
Species: Bosea sp. LC85 (100%)
2 2733 bp 71.13 4.96 100.11
SCNpilot_expt_300_bf_scaffold_32323
Species: Microvirga lotononidis (50%)
2 1664 bp 68.69 4.22 85.64
SCNpilot_expt_300_bf_scaffold_11358
Species: Bosea sp. LC85 (100%)
2 2034 bp 68.44 4.32 96.17
SCNpilot_expt_300_bf_scaffold_29879
Species: Bosea sp. LC85 (100%)
2 1009 bp 63.43 3.48 48.76
SCNpilot_expt_300_bf_scaffold_10537
Species: Microvirga aerilata (50%)
2 2130 bp 67.09 3.30 95.21
SCNpilot_expt_300_bf_scaffold_14066
Species: Bosea sp. LC85 (100%)
2 1795 bp 69.03 4.06 99.44
SCNpilot_expt_300_bf_scaffold_10794
Species: Bosea sp. LC85 (100%)
2 2099 bp 67.32 5.38 94.90
SCNpilot_expt_300_bf_scaffold_16020
Species: Mesorhizobium sp. LSHC420B00 (50%)
2 1656 bp 66.12 7.43 90.76
SCNpilot_expt_300_bf_scaffold_29631
Species: Bosea sp. LC85 (100%)
2 1019 bp 71.15 5.17 92.15
SCNpilot_expt_300_bf_scaffold_18656
Species: Bosea sp. LC85 (100%)
2 1507 bp 67.35 3.66 96.15
SCNpilot_expt_300_bf_scaffold_20441
Species: Bosea sp. LC85 (100%)
2 1417 bp 67.33 3.90 99.51
SCNpilot_expt_300_bf_scaffold_26512
Species: Bosea sp. LC85 (100%)
2 1154 bp 67.16 3.48 85.27
SCNpilot_expt_300_bf_scaffold_15141
Species: Bosea sp. LC85 (100%)
2 1715 bp 63.15 3.66 84.31
SCNpilot_expt_300_bf_scaffold_20957
Species: Bosea sp. LC85 (50%)
2 1392 bp 68.46 3.61 92.24
SCNpilot_expt_300_bf_scaffold_38678
Species: Rhizobium sp. AP16 (50%)
2 1733 bp 54.01 3.48 51.59
SCNpilot_expt_300_bf_scaffold_22566
Species: Bosea sp. LC85 (100%)
2 1321 bp 70.40 3.80 97.20
SCNpilot_expt_300_bf_scaffold_29126
Species: Skermanella stibiiresistens (50%)
2 1041 bp 68.88 3.86 100.29
SCNpilot_expt_300_bf_scaffold_29382
Species: Microvirga lotononidis (100%)
2 1030 bp 63.88 3.41 95.53
SCNpilot_expt_300_bf_scaffold_27942
Species: Bosea sp. LC85 (50%)
2 1088 bp 67.19 6.46 101.20
SCNpilot_expt_300_bf_scaffold_29639
Species: Bosea sp. LC85 (100%)
2 1019 bp 67.91 3.94 92.74
SCNpilot_expt_300_bf_scaffold_21783
Species: Bosea sp. LC85 (100%)
2 1354 bp 68.17 6.67 95.94
Displaying items 301-350 of 431 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.