Consensus taxonomy: Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria
from comparison: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_17168
Species:
Bradyrhizobium sp. STM 3843 (50%)
|
2 | 1588 bp | 67.76 | 4.11 | 92.38 | |
SCNpilot_expt_300_bf_scaffold_15917
Species:
Bosea sp. LC85 (100%)
|
2 | 1663 bp | 68.79 | 2.72 | 95.97 | |
SCNpilot_expt_300_bf_scaffold_25368
Species:
Methylobacterium aquaticum (50%)
|
2 | 1205 bp | 68.55 | 5.83 | 96.60 | |
SCNpilot_expt_300_bf_scaffold_27953
Species:
Methylobacterium sp. 4-46 (50%)
|
2 | 1087 bp | 66.97 | 5.08 | 67.62 | |
SCNpilot_expt_300_bf_scaffold_20973
Species:
Bosea sp. LC85 (50%)
|
2 | 1391 bp | 64.13 | 6.14 | 98.56 | |
SCNpilot_expt_300_bf_scaffold_28519
Species:
Bosea sp. LC85 (100%)
|
2 | 1064 bp | 67.67 | 2.83 | 98.68 | |
SCNpilot_expt_300_bf_scaffold_38858
Species:
Bosea sp. LC85 (100%)
|
2 | 1406 bp | 69.20 | 5.00 | 73.83 | |
SCNpilot_expt_300_bf_scaffold_24282
Species:
Bosea sp. LC85 (100%)
|
2 | 1251 bp | 66.19 | 4.41 | 86.81 | |
SCNpilot_expt_300_bf_scaffold_9815
Species:
Afipia felis (50%)
|
2 | 2219 bp | 70.71 | 4.98 | 99.77 | |
SCNpilot_expt_300_bf_scaffold_15163
Species:
Microvirga lotononidis (50%)
|
2 | 1713 bp | 68.77 | 3.52 | 99.30 | |
SCNpilot_expt_300_bf_scaffold_26536
Species:
Bosea sp. LC85 (100%)
|
2 | 1153 bp | 66.70 | 3.70 | 100.69 | |
SCNpilot_expt_300_bf_scaffold_15421
Species:
Bosea sp. LC85 (100%)
|
2 | 1696 bp | 69.58 | 4.59 | 99.94 | |
SCNpilot_expt_300_bf_scaffold_36582
Species:
Bosea sp. LC85 (100%)
|
2 | 1492 bp | 59.18 | 4.54 | 85.86 | |
SCNpilot_expt_300_bf_scaffold_24030
Species:
Bosea sp. LC85 (100%)
|
2 | 1262 bp | 72.03 | 3.98 | 100.08 | |
SCNpilot_expt_300_bf_scaffold_22080
Species:
Oligotropha carboxidovorans (100%)
|
2 | 1342 bp | 57.82 | 3.93 | 97.47 | |
SCNpilot_expt_300_bf_scaffold_14616
Species:
Bosea sp. LC85 (100%)
|
2 | 1754 bp | 67.84 | 4.44 | 88.08 | |
SCNpilot_expt_300_bf_scaffold_28784
Species:
Mesorhizobium sp. LSJC280B00 (50%)
|
2 | 1054 bp | 68.98 | 4.52 | 96.20 | |
SCNpilot_expt_300_bf_scaffold_19672
Species:
Bosea sp. LC85 (50%)
|
2 | 1455 bp | 69.69 | 8.45 | 84.74 | |
SCNpilot_expt_300_bf_scaffold_21041
Species:
Rhizobium sp. YS-1r (50%)
|
2 | 1388 bp | 67.51 | 5.06 | 100.07 | |
SCNpilot_expt_300_bf_scaffold_22084
Species:
Methylobacterium nodulans (50%)
|
2 | 1341 bp | 68.98 | 3.56 | 98.88 | |
SCNpilot_expt_300_bf_scaffold_22341
Species:
Agrobacterium vitis (50%)
|
2 | 1331 bp | 66.42 | 3.96 | 83.62 | |
SCNpilot_expt_300_bf_scaffold_23485
Species:
Bradyrhizobium sp. WSM1253 (50%)
|
2 | 1283 bp | 66.87 | 3.52 | 99.38 | |
SCNpilot_expt_300_bf_scaffold_27974
Species:
Rhizobium etli (50%)
|
2 | 1087 bp | 68.72 | 4.39 | 93.56 | |
SCNpilot_expt_300_bf_scaffold_21815
Species:
Bosea sp. LC85 (50%)
|
2 | 1353 bp | 67.33 | 4.82 | 98.23 | |
SCNpilot_expt_300_bf_scaffold_19423
Species:
Acidocella aminolytica (50%)
|
2 | 1470 bp | 66.80 | 4.10 | 93.47 | |
SCNpilot_expt_300_bf_scaffold_22858
Species:
Ensifer adhaerens (50%)
|
2 | 1309 bp | 70.51 | 4.60 | 86.86 | |
SCNpilot_expt_300_bf_scaffold_14882
Species:
Bosea sp. LC85 (100%)
|
2 | 3168 bp | 66.35 | 4.28 | 88.45 | |
SCNpilot_expt_300_bf_scaffold_28026
Species:
Bosea sp. LC85 (100%)
|
2 | 1085 bp | 71.34 | 6.01 | 99.26 | |
SCNpilot_expt_300_bf_scaffold_15450
Species:
uncultured bacterium (100%)
|
1 | 1694 bp | 57.73 | 3.11 | 99.88 | |
SCNpilot_expt_300_bf_scaffold_26823
Species:
Bosea sp. LC85 (100%)
|
1 | 1140 bp | 67.89 | 4.62 | 72.11 | |
SCNpilot_expt_300_bf_scaffold_29435
Species:
Rhizobium sp. YS-1r (100%)
|
1 | 1028 bp | 66.15 | 4.15 | 99.81 | |
SCNpilot_expt_300_bf_scaffold_24060
Species:
Nitratireductor indicus (100%)
|
1 | 1261 bp | 71.85 | 3.38 | 99.68 | |
SCNpilot_expt_300_bf_scaffold_19444
Species:
Bosea sp. LC85 (100%)
|
1 | 1469 bp | 69.91 | 2.90 | 99.25 | |
SCNpilot_expt_300_bf_scaffold_17477
Species:
Bosea sp. LC85 (100%)
|
1 | 1570 bp | 69.30 | 5.44 | 99.94 | |
SCNpilot_expt_300_bf_scaffold_30024
Species:
Devosia insulae (100%)
|
1 | 1003 bp | 64.81 | 3.50 | 20.94 | |
SCNpilot_expt_300_bf_scaffold_27493
Species:
Bosea sp. LC85 (100%)
|
1 | 1109 bp | 69.61 | 2.72 | 86.02 | |
SCNpilot_expt_300_bf_scaffold_18216
Species:
Bosea sp. LC85 (100%)
|
1 | 1529 bp | 69.78 | 4.43 | 85.35 | |
SCNpilot_expt_300_bf_scaffold_21599
Species:
Bosea sp. LC85 (100%)
|
1 | 1363 bp | 71.02 | 4.79 | 96.18 | |
SCNpilot_expt_300_bf_scaffold_17752
Species:
Bosea sp. LC85 (100%)
|
1 | 1555 bp | 70.61 | 5.00 | 84.69 | |
SCNpilot_expt_300_bf_scaffold_29202
Species:
Bosea sp. LC85 (100%)
|
1 | 1037 bp | 66.54 | 5.08 | 99.81 | |
SCNpilot_expt_300_bf_scaffold_20267
Species:
Bradyrhizobium japonicum (100%)
|
1 | 1425 bp | 70.25 | 4.23 | 100.00 | |
SCNpilot_expt_300_bf_scaffold_25435
Species:
Bosea sp. LC85 (100%)
|
1 | 1201 bp | 68.03 | 4.81 | 99.92 | |
SCNpilot_expt_300_bf_scaffold_25437
Species:
Bosea sp. LC85 (100%)
|
1 | 1201 bp | 69.36 | 3.55 | 99.92 | |
SCNpilot_expt_300_bf_scaffold_20017
Species:
Bradyrhizobium sp. S23321 (100%)
|
1 | 1438 bp | 71.21 | 4.71 | 99.93 | |
SCNpilot_expt_300_bf_scaffold_19732
Species:
Sphingobium herbicidovorans (100%)
|
1 | 1452 bp | 64.67 | 4.84 | 88.02 | |
SCNpilot_expt_300_bf_scaffold_29217
Species:
Bosea sp. LC85 (100%)
|
1 | 1036 bp | 68.15 | 4.60 | 99.90 | |
SCNpilot_expt_300_bf_scaffold_28609
Species:
Bosea sp. LC85 (100%)
|
1 | 1061 bp | 65.41 | 6.15 | 77.76 | |
SCNpilot_expt_300_bf_scaffold_19763
Species:
Magnetospirillum gryphiswaldense (100%)
|
1 | 1450 bp | 66.28 | 3.29 | 94.97 | |
SCNpilot_expt_300_bf_scaffold_15005
Species:
Bosea sp. LC85 (100%)
|
1 | 1725 bp | 66.61 | 3.78 | 99.13 | |
SCNpilot_expt_300_bf_scaffold_25735
Species:
Bosea sp. LC85 (100%)
|
1 | 1189 bp | 71.99 | 3.59 | 94.87 |