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SCNpilot_expt_300_bf_scaffold_675

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_675_1
unknown

Not on your lists

comp(1..177)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_675_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(428..1006)
DNA (579bp) protein (193aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB28_CHIPD
peptide deformylase
SCNpilot_expt_300_bf_scaffold_675_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1066..1467)
DNA (402bp) protein (134aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=929713 specie
Holliday junction resolvase n=1 Tax=Niabella aurantiaca RepID=UPI0003716BB9
Holliday junction resolvase
SCNpilot_expt_300_bf_scaffold_675_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1607..2548)
DNA (942bp) protein (314aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000313|EMBL:AEW00694.1}; EC=2.5.1.- {ECO:0000313|EMBL:AEW00694.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sp
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI77_NIAKG rbh
4-hydroxybenzoate octaprenyltransferase
SCNpilot_expt_300_bf_scaffold_675_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2581..3096)
DNA (516bp) protein (172aa)
RNA methyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI0003804E78
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:AHF15201.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.
SCNpilot_expt_300_bf_scaffold_675_6
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3251..4897)
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037C566E rbh
Membrane protein {ECO:0000313|EMBL:KFF15349.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytop
hypothetical protein
SCNpilot_expt_300_bf_scaffold_675_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4999..7593
DNA (2595bp) protein (865aa)
DNA mismatch repair protein MutS n=1 Tax=Niabella soli DSM 19437 RepID=H1NNR9_9SPHI rbh
DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
SCNpilot_expt_300_bf_scaffold_675_8
unknown

Not on your lists

7671..8270
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_675_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8325..8714)
DNA (390bp) protein (130aa)
Nuclear protein SET n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC7_NIAKG
nuclear protein SET
Nuclear protein SET {ECO:0000313|EMBL:AEV96733.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (stra
SCNpilot_expt_300_bf_scaffold_675_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8800..10194
DNA (1395bp) protein (465aa)
Magnesium transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC6_NIAKG rbh
magnesium transporter; K06213 magnesium transporter Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
magnesium transporter
SCNpilot_expt_300_bf_scaffold_675_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10322..12157
DNA (1836bp) protein (612aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glutamine amidotransferase n=1 Tax=Niabella aurantiaca RepID=UPI0003713D32 rbh
glutamine amidotransferase
SCNpilot_expt_300_bf_scaffold_675_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12190..14448
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC3_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96729.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_expt_300_bf_scaffold_675_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14813..15052)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO45723.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
SCNpilot_expt_300_bf_scaffold_675_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15127..16500)
DNA (1374bp) protein (458aa)
GTPase Der n=1 Tax=Niabella soli DSM 19437 RepID=H1NKU3_9SPHI rbh
GTP-binding protein Der
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia
SCNpilot_expt_300_bf_scaffold_675_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16534..17400)
DNA (867bp) protein (289aa)
GTPase Era n=1 Tax=Niabella aurantiaca RepID=UPI00035D1897 rbh
era; GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="
SCNpilot_expt_300_bf_scaffold_675_16
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17504..18019)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B161_9DELT
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
SCNpilot_expt_300_bf_scaffold_675_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18576..19070)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CDE54
Uncharacterized protein {ECO:0000313|EMBL:GAO45715.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_expt_300_bf_scaffold_675_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19452..21611
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374E8F3 rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
TonB-dependent receptor
Displaying 18 items

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