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SCNpilot_expt_300_bf_scaffold_26

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Displaying items 1-30 of 618 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_26_1
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003741CB7
integrase
Integrase {ECO:0000313|EMBL:AJC46516.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_expt_300_bf_scaffold_26_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95..2194)
DNA (2100bp) protein (700aa)
glycosyl transferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E0E451 rbh
Glycosyltransferase {ECO:0000313|EMBL:EMI49046.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophil
glycosyltransferase
SCNpilot_expt_300_bf_scaffold_26_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2291..4696
DNA (2406bp) protein (802aa)
mrcB; penicillin-binding protein 1B (EC:2.4.1.129)
penicillin-binding protein 1B n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000360FADA rbh
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR00
SCNpilot_expt_300_bf_scaffold_26_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4704..5234
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000373C753
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF52793.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Sten
SCNpilot_expt_300_bf_scaffold_26_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5271..7304
DNA (2034bp) protein (678aa)
Putative ATP-dependent DNA helicase-related protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FR41_STRMK rbh
Putative ATP-dependent DNA helicase-related protein {ECO:0000313|EMBL:CAQ47094.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomo
ATP-dependent DNA helicase-like protein
SCNpilot_expt_300_bf_scaffold_26_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7301..8005
DNA (705bp) protein (235aa)
glycoprotease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFD619 rbh
Glycoprotease {ECO:0000313|EMBL:AHY58033.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizop
putative glycoprotease
SCNpilot_expt_300_bf_scaffold_26_7
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8087..8431)
DNA (345bp) protein (115aa)
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_expt_300_bf_scaffold_26_8
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8469..9344)
DNA (876bp) protein (292aa)
phenazine antibiotic biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DBA23C rbh
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:KHM98256.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="
Epimerase, PhzC/PhzF
SCNpilot_expt_300_bf_scaffold_26_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9369..10229)
DNA (861bp) protein (287aa)
phenazine biosynthesis protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DE68A2 rbh
phenazine biosynthesis protein PhzF family
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ADV26663.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" s
SCNpilot_expt_300_bf_scaffold_26_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10444..13053
DNA (2610bp) protein (870aa)
Aspartate kinase {ECO:0000313|EMBL:KDE90948.1}; EC=2.7.2.4 {ECO:0000313|EMBL:KDE90948.1};; EC=4.1.1.20 {ECO:0000313|EMBL:KDE90948.1};; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacte
lysA; Aspartokinase (EC:2.7.2.4 4.1.1.20)
Aspartokinase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KKR4_STEMA rbh
SCNpilot_expt_300_bf_scaffold_26_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13135..14490
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000318D5C3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCP10354.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
SCNpilot_expt_300_bf_scaffold_26_12
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14471..15877
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZG8_9GAMM rbh
SCNpilot_expt_300_bf_scaffold_26_13
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16003..16800
DNA (798bp) protein (266aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase family protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E8D3_9XANT rbh
Dienelactone hydrolase {ECO:0000313|EMBL:KHL51651.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestr
SCNpilot_expt_300_bf_scaffold_26_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16862..17860)
DNA (999bp) protein (333aa)
ispB; octaprenyl-diphosphate synthase (EC:2.5.1.- 2.5.1.1 2.5.1.10 2.5.1.29)
octaprenyl-diphosphate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030765AD rbh
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:AHY59929.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Steno
SCNpilot_expt_300_bf_scaffold_26_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18038..19651
DNA (1614bp) protein (538aa)
alpha-glucosidase n=1 Tax=Pseudomonas geniculata RepID=UPI000299F5E9 rbh
Alpha-glucosidase {ECO:0000313|EMBL:AHY59928.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rh
alpha amylase
SCNpilot_expt_300_bf_scaffold_26_16
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20035..22797)
DNA (2763bp) protein (921aa)
TonB-dependent receptor n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WT46_PSEUU rbh
TonB-dependent receptor {ECO:0000313|EMBL:ADV27275.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" s
TonB-dependent receptor
SCNpilot_expt_300_bf_scaffold_26_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23059..25125)
DNA (2067bp) protein (689aa)
Glycoside hydrolase 97 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS11_PSEUU rbh
Glycoside hydrolase 97 {ECO:0000313|EMBL:ADV26960.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" so
glycoside hydrolase
SCNpilot_expt_300_bf_scaffold_26_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25322..26803
DNA (1482bp) protein (494aa)
Major facilitator superfamily MFS_1 n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SN81_STRM5 rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACF50726.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotropho
SCNpilot_expt_300_bf_scaffold_26_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26803..28533
DNA (1731bp) protein (577aa)
Cyclomaltodextrin glucanotransferase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KKS7_STEMA rbh
amyM; cyclomaltodextrin glucanotransferase
Cyclomaltodextrin glucanotransferase {ECO:0000313|EMBL:CCH11666.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrop
SCNpilot_expt_300_bf_scaffold_26_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28625..29005
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZF8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCP10373.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
SCNpilot_expt_300_bf_scaffold_26_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29057..30124)
DNA (1068bp) protein (356aa)
Maltose transport gene repressor {ECO:0000313|EMBL:CCP10379.1}; EC=5.1.1.1 {ECO:0000313|EMBL:CCP10379.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
LacI family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E29A6F rbh
LacI family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_26_22
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30162..30506)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M0B8_METRJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB26029.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
SCNpilot_expt_300_bf_scaffold_26_23
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30593..31186
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNL7_ACHXA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP17056.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylos
SCNpilot_expt_300_bf_scaffold_26_24
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31322..31861
DNA (540bp) protein (180aa)
single-stranded DNA-binding protein n=1 Tax=Xanthomonas oryzae RepID=UPI0003137FBC
single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=366649 species="Bacteria; Proteobacteria; Gamm
SCNpilot_expt_300_bf_scaffold_26_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32020..32754)
DNA (735bp) protein (245aa)
NADPH-dependent FMN reductase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B493B7 rbh
Arsenic resistance protein ArsH {ECO:0000313|EMBL:EMI47822.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomon
arsH; Arsenic resistance protein ArsH
SCNpilot_expt_300_bf_scaffold_26_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32772..33104
DNA (333bp) protein (111aa)
ArsR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TVQ9_STEMA
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMI47823.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotro
arsR; ArsR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_26_27
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33159..33671
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031315B7
ArsC family transcriptional regulator {ECO:0000313|EMBL:KGM57785.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysob
arsC; arsenate reductase ArsC
SCNpilot_expt_300_bf_scaffold_26_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33685..34716
DNA (1032bp) protein (344aa)
arsenic transporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E2DAEC rbh
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AEM51633.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas m
SCNpilot_expt_300_bf_scaffold_26_29
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34905..36071
DNA (1167bp) protein (389aa)
Peptidase S58 DmpA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH71_9BACT rbh
D-aminopeptidase {ECO:0000313|EMBL:AKC88307.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas s
peptidase S58 DmpA
SCNpilot_expt_300_bf_scaffold_26_30
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36123..37232)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T232_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT67950.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
Displaying items 1-30 of 618 in total

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