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SCNpilot_expt_300_bf_scaffold_69

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Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_69_1
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..181
DNA (180bp) protein (60aa)
Methyl-accepting chemotaxis protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FR40_9XANT
Chemotaxis protein {ECO:0000313|EMBL:KGE52453.1}; TaxID=325777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis
hypothetical protein
SCNpilot_expt_300_bf_scaffold_69_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191..1036
DNA (846bp) protein (282aa)
CheR-type MCP methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
chemotaxis protein CheR n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003612A31 rbh
SCNpilot_expt_300_bf_scaffold_69_3
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1033..1629
DNA (597bp) protein (199aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000255|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000255|HAMAP-Rule:MF_01440};; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD n=5 Tax=Xanthomonas RepID=CHED_XANC8 rbh
chemoreceptor glutamine deamidase CheD
SCNpilot_expt_300_bf_scaffold_69_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1626..2702
DNA (1077bp) protein (359aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=216778 species="Bacteria; Proteobacteria; Gammap
chemotaxis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EEE553 rbh
two-component system response regulatory protein
SCNpilot_expt_300_bf_scaffold_69_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2706..5231
DNA (2526bp) protein (842aa)
C-di-GMP phosphodiesterase A n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SS70_XANCT rbh
C-di-GMP phosphodiesterase A {ECO:0000313|EMBL:CCP38909.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
c-di-GMP phosphodiesterase A
SCNpilot_expt_300_bf_scaffold_69_6
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5922..6047
DNA (126bp) protein (42aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00036C6F84
NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98010.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC
SCNpilot_expt_300_bf_scaffold_69_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6133..7218
DNA (1086bp) protein (362aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F7132F rbh
Membrane protein {ECO:0000313|EMBL:AHY58610.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
membrane protein
SCNpilot_expt_300_bf_scaffold_69_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7240..7971)
DNA (732bp) protein (244aa)
Histidine utilization repressor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQ78_STEMA rbh
Histidine utilization repressor
HTH-type transcriptional repressor yvoA {ECO:0000313|EMBL:EZP45496.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" sour
SCNpilot_expt_300_bf_scaffold_69_9
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7991..9361)
DNA (1371bp) protein (457aa)
N-formimino-L-glutamate deiminase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AB64 rbh
N-formimino-L-glutamate deiminase
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:AJC44907.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomon
SCNpilot_expt_300_bf_scaffold_69_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9423..10631
DNA (1209bp) protein (403aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
imidazolonepropionase (EC:3.5.2.7)
imidazolonepropionase n=1 Tax=Xanthomonas arboricola RepID=UPI0002ECCB98 rbh
SCNpilot_expt_300_bf_scaffold_69_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10710..12245
DNA (1536bp) protein (512aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
histidine ammonia-lyase (EC:4.3.1.3)
histidine ammonia-lyase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F40C rbh
SCNpilot_expt_300_bf_scaffold_69_12
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12385..13260
DNA (876bp) protein (292aa)
Formiminoglutamase {ECO:0000313|EMBL:CCP38333.1}; EC=3.5.3.8 {ECO:0000313|EMBL:CCP38333.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xa
Formiminoglutamase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SU41_XANCT rbh
hypothetical protein
SCNpilot_expt_300_bf_scaffold_69_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13257..14924
DNA (1668bp) protein (556aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49)
urocanate hydratase n=1 Tax=Dyella japonica RepID=UPI0002E14830
SCNpilot_expt_300_bf_scaffold_69_14
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15142..16668
DNA (1527bp) protein (509aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWF9_9GAMM rbh
beta-lactamase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_300_bf_scaffold_69_15
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16739..17104
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E734D
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_300_bf_scaffold_69_16
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17097..17666
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035FCFC8
RNA polymerase sigma-70 factor
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_300_bf_scaffold_69_17
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17663..17983
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B8D0E
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_expt_300_bf_scaffold_69_18
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18126..18632
DNA (507bp) protein (169aa)
Putative acetyltransferase, GNAT family n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1I8I2_PSEE4
acetyltransferase
Putative acetyltransferase, GNAT family {ECO:0000313|EMBL:CAK16046.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
SCNpilot_expt_300_bf_scaffold_69_19
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18751..19482)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000377DC45 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM55748.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
hypothetical protein
SCNpilot_expt_300_bf_scaffold_69_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19595..19858)
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311B3F8
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AHY57460.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
SCNpilot_expt_300_bf_scaffold_69_21
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20424..21497)
DNA (1074bp) protein (358aa)
Beta-lactamase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAE2_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EED37789.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. S
beta-lactamase
SCNpilot_expt_300_bf_scaffold_69_22
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22037..24520)
DNA (2484bp) protein (828aa)
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC8390 rbh
Exported oligopeptidase {ECO:0000313|EMBL:EZP45517.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
peptidase S9 prolyl oligopeptidase active site domain-containing protein
SCNpilot_expt_300_bf_scaffold_69_23
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24746..25756
DNA (1011bp) protein (337aa)
Putative signal transduction protein n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RVZ7_XANCB
Diguanylate cyclase {ECO:0000313|EMBL:KCX01275.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola
signal transduction protein
SCNpilot_expt_300_bf_scaffold_69_24
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25828..26526)
DNA (699bp) protein (233aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7UM31_STEMA rbh
Ompa5 protein {ECO:0000313|EMBL:EZP43223.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. R
outer membrane lipoprotein
SCNpilot_expt_300_bf_scaffold_69_25
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26813..27256)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XI82_9XANT
Uncharacterized protein {ECO:0000313|EMBL:AKC87866.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
hypothetical protein
SCNpilot_expt_300_bf_scaffold_69_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27361..29043
DNA (1683bp) protein (561aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:EQM87489.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EQM87489.1};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
Long-chain fatty acid--CoA ligase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L5D7_STEMA rbh
fadD; long-chain fatty acyl CoA ligase
SCNpilot_expt_300_bf_scaffold_69_27
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29200..30087
DNA (888bp) protein (296aa)
Enoyl-CoA hydratase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZCN2_9XANT rbh
Strain LMCP11 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23833.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;
rpfF; RpfF protein
SCNpilot_expt_300_bf_scaffold_69_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30112..32289)
DNA (2178bp) protein (726aa)
rpfC; Sensory/regulatory protein rpfC (EC:2.7.3.-)
ATPase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D653D0 rbh
ATPase {ECO:0000313|EMBL:KDE89731.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" s
SCNpilot_expt_300_bf_scaffold_69_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32291..33352)
DNA (1062bp) protein (354aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYT7_STEMA rbh
response regulator receiver modulated metal dependent phosphohydrolase
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:AEM51210.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
SCNpilot_expt_300_bf_scaffold_69_30
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33546..35063)
DNA (1518bp) protein (506aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F5CEA5 rbh
lysyl-tRNA synthetase, class II
Displaying items 1-30 of 198 in total

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