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SCNpilot_expt_300_bf_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 229 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_106_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..658
DNA (657bp) protein (219aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000364E30E
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACS20799.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Va
SCNpilot_expt_300_bf_scaffold_106_2
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

760..2490
DNA (1731bp) protein (577aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000374948E rbh
Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) {ECO:0000313|EMBL:CDS50377.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
methyl-accepting chemotaxis sensory transducer
SCNpilot_expt_300_bf_scaffold_106_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2586..4550
DNA (1965bp) protein (655aa)
flagellar hook protein FlgK n=1 Tax=Variovorax paradoxus RepID=UPI0003728620 rbh
flgK; flagellar hook-associated protein 1 FlgK
Flagellar hook-associated protein 1 FlgK {ECO:0000313|EMBL:AGU51415.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari
SCNpilot_expt_300_bf_scaffold_106_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4586..5797
DNA (1212bp) protein (404aa)
flagellar hook-associated protein FlgL n=1 Tax=Variovorax paradoxus RepID=UPI000376BB96 rbh
flgL; flagellar hook-associated protein FlgL
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:ACS20794.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_expt_300_bf_scaffold_106_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5881..7005
DNA (1125bp) protein (375aa)
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Variovorax paradoxus B4 RepID=T1XJJ7_VARPD rbh
SCNpilot_expt_300_bf_scaffold_106_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7002..7799)
DNA (798bp) protein (266aa)
flagellar biosynthesis protein FliR n=1 Tax=Variovorax paradoxus RepID=UPI00036A1966 rbh
fliR; flagellar biosynthetic protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
SCNpilot_expt_300_bf_scaffold_106_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7796..8065)
DNA (270bp) protein (90aa)
flagellar biosynthesis protein FliQ n=1 Tax=Variovorax paradoxus RepID=UPI000366ACD3
fliQ; flagellar biosynthetic protein FliQ
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:AGU51412.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
SCNpilot_expt_300_bf_scaffold_106_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8077..8835)
DNA (759bp) protein (253aa)
flagellar biosynthesis protein FliP n=1 Tax=Variovorax paradoxus RepID=UPI00035D3087 rbh
fliP; flagellar biosynthetic protein FliP
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:AGU51411.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
SCNpilot_expt_300_bf_scaffold_106_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8832..9335)
DNA (504bp) protein (168aa)
flagellar biosynthesis protein FliO n=1 Tax=Variovorax paradoxus RepID=UPI000382B248
fliO; putative flagellar biosynthetic protein FliO
Putative flagellar biosynthetic protein FliO {ECO:0000313|EMBL:AGU51410.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
SCNpilot_expt_300_bf_scaffold_106_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9332..9802)
DNA (471bp) protein (157aa)
flagellar motor switch protein FliN n=1 Tax=Variovorax paradoxus RepID=UPI000365DBF8
flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ACS20789.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
SCNpilot_expt_300_bf_scaffold_106_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9795..10799)
DNA (1005bp) protein (335aa)
flagellar motor switch protein FliM n=1 Tax=Variovorax paradoxus RepID=UPI00037793F2 rbh
fliM; flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:AGU51408.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
SCNpilot_expt_300_bf_scaffold_106_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10827..11330)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037F7465
fliL; putative flagellar basal body-associated protein FliL
Putative flagellar basal body-associated protein FliL {ECO:0000313|EMBL:AGU51407.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
SCNpilot_expt_300_bf_scaffold_106_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11485..12924)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000365E76D rbh
fliK2; putative flagellar hook-length control protein FliK
Putative flagellar hook-length control protein FliK {ECO:0000313|EMBL:AGU51406.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s
SCNpilot_expt_300_bf_scaffold_106_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12941..13396)
DNA (456bp) protein (152aa)
flagellar export protein FliJ n=1 Tax=Variovorax paradoxus RepID=UPI000377A1C1
fliJ; flagellar export protein FliJ
Flagellar export protein FliJ {ECO:0000313|EMBL:AGU51405.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para
SCNpilot_expt_300_bf_scaffold_106_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13393..14862)
DNA (1470bp) protein (490aa)
FliI/YscN family ATPase (EC:3.6.3.14)
ATPase, FliI/YscN family {ECO:0000313|EMBL:ACS20784.1}; EC=3.6.3.14 {ECO:0000313|EMBL:ACS20784.1};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
ATP synthase n=1 Tax=Variovorax paradoxus RepID=UPI00035F81FE rbh
SCNpilot_expt_300_bf_scaffold_106_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14868..15686)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000367DFCF rbh
fliH; putative flagellar assembly protein FliH
Putative flagellar assembly protein FliH {ECO:0000313|EMBL:AGU51403.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari
SCNpilot_expt_300_bf_scaffold_106_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15673..16671)
DNA (999bp) protein (333aa)
flagellar motor switch protein FliG n=1 Tax=Variovorax paradoxus RepID=UPI000361A943 rbh
flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000313|EMBL:ACS20782.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_expt_300_bf_scaffold_106_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16664..18400)
DNA (1737bp) protein (579aa)
flagellar M-ring protein FliF n=1 Tax=Variovorax paradoxus RepID=UPI000360ACFA rbh
fliF; flagellar MS-ring protein rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxu
SCNpilot_expt_300_bf_scaffold_106_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18691..19011
DNA (321bp) protein (107aa)
flagellar hook-basal body protein FliE n=1 Tax=Variovorax paradoxus RepID=UPI00036B48AC
flagellar hook-basal body complex subunit FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
SCNpilot_expt_300_bf_scaffold_106_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19191..20846
DNA (1656bp) protein (552aa)
Flagellin n=4 Tax=Escherichia coli RepID=G4W6X3_ECOLX rbh
fliC; flagellar filament structural protein (flagellin)
Flagellin {ECO:0000313|EMBL:AEL33275.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
SCNpilot_expt_300_bf_scaffold_106_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21020..21376
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035FEC27
flaG; putative flagellar protein FlaG
Putative flagellar protein FlaG {ECO:0000313|EMBL:AGU51398.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
SCNpilot_expt_300_bf_scaffold_106_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21443..22888
DNA (1446bp) protein (482aa)
flagellar hook protein n=1 Tax=Variovorax paradoxus RepID=UPI00037347F9 rbh
flagellar hook-associated 2 domain-containing protein
Flagellar hook-associated 2 domain protein {ECO:0000313|EMBL:ACS20778.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
SCNpilot_expt_300_bf_scaffold_106_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22929..23348
DNA (420bp) protein (140aa)
flagellar biosynthesis protein FliS n=1 Tax=Variovorax paradoxus RepID=UPI0003810BA0
fliS; flagellar protein FliS
Flagellar protein FliS {ECO:0000313|EMBL:AGU51396.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B
SCNpilot_expt_300_bf_scaffold_106_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23362..23721
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000378DB35
fliT; putative flagellar protein FliT
Putative flagellar protein FliT {ECO:0000313|EMBL:AGU51395.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
SCNpilot_expt_300_bf_scaffold_106_25
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23751..25055
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003737C45 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDS50295.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_
hypothetical protein
SCNpilot_expt_300_bf_scaffold_106_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25052..25351
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003723368
flagellar biosynthesis protein
Flagellar biosynthesis protein {ECO:0000313|EMBL:ACS20774.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para
SCNpilot_expt_300_bf_scaffold_106_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25658..26062
DNA (405bp) protein (135aa)
flagellar transcriptional regulator FlhD n=1 Tax=Variovorax paradoxus RepID=UPI00036A6CD1
flagellar transcriptional activator
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
SCNpilot_expt_300_bf_scaffold_106_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26059..26646
DNA (588bp) protein (196aa)
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037DDA98 rbh
transcriptional activator FlhC
Flagellar transcriptional regulator FlhC {ECO:0000255|HAMAP-Rule:MF_01891}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="V
SCNpilot_expt_300_bf_scaffold_106_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26713..27573
DNA (861bp) protein (287aa)
flagellar motor protein MotA n=1 Tax=Variovorax paradoxus RepID=UPI00035F602A rbh
chemotaxis MotA protein
Chemotaxis MotA protein {ECO:0000313|EMBL:ACS20771.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_expt_300_bf_scaffold_106_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27610..28575
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003822AA9 rbh
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ACS20770.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
Displaying items 1-30 of 229 in total

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