name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_301_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30..326)
|
Transcriptional regulator, XRE family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120L8_POLSJ
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABE47024.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polarom
|
|
SCNpilot_expt_300_bf_scaffold_301_2
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(392..775)
|
DNA methyltransferase n=1 Tax=Thauera terpenica 58Eu RepID=S9ZIG6_9RHOO
DNA methyltransferase
DNA methyltransferase {ECO:0000313|EMBL:AJW47675.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilyti
|
|
SCNpilot_expt_300_bf_scaffold_301_3
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
975..1280
|
transposase n=1 Tax=Bordetella sp. FB-8 RepID=UPI000360C5E2
transposase
Putative transposase {ECO:0000313|EMBL:AFJ89887.1}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ00
|
|
SCNpilot_expt_300_bf_scaffold_301_4
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1277..2110
|
Mobile element protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2H8W7_BURVI
rbh
Mobile element protein {ECO:0000313|EMBL:ERJ34623.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
transposase
|
|
SCNpilot_expt_300_bf_scaffold_301_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2656..3006)
|
IS66 Orf2 family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSL1_9BURK
IS66 Orf2 family protein
IS66 Orf2 family protein {ECO:0000313|EMBL:EHL24673.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;
|
|
SCNpilot_expt_300_bf_scaffold_301_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2982..3422)
|
Transposase IS3/IS911 family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYG1_VARPS
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACS18920.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
|
|
SCNpilot_expt_300_bf_scaffold_301_7
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3581..3799
|
Integrase family protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IEE2_9BURK
Integrase family protein {ECO:0000313|EMBL:EIF29094.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
integrase catalytic subunit
|
|
SCNpilot_expt_300_bf_scaffold_301_8
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3815..4534
|
Integrase family protein n=1 Tax=Burkholderia sp. BT03 RepID=J3BEU6_9BURK
rbh
Integrase catalytic region {ECO:0000313|EMBL:EUC14764.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia s
integrase catalytic subunit
|
|
SCNpilot_expt_300_bf_scaffold_301_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5259..6251)
|
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W8U2_9RALS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_301_10
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6268..7179)
|
Transcriptional regulator, IclR family n=1 Tax=Burkholderia sp. YI23 RepID=G8MH25_9BURK
iclR; transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AET92892.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bu
|
|
SCNpilot_expt_300_bf_scaffold_301_11
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7356..8345
|
Ferredoxin--NAD(+) reductase; K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=GWA2_Curvibacter_64_110_curated
2Fe-2S iron-sulfur cluster binding domain protein
Ferredoxin--NAD(+) reductase-like protein id=1270799 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
|
|
SCNpilot_expt_300_bf_scaffold_301_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8361..9605
|
Putative anthranilate 1,2-dioxygenase, large subunit n=1 Tax=Variovorax paradoxus B4 RepID=T1XKW1_VARPD
putative anthranilate 1,2-dioxygenase, large subunit
Putative anthranilate 1,2-dioxygenase, large subunit {ECO:0000313|EMBL:AGU53522.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
|
|
SCNpilot_expt_300_bf_scaffold_301_13
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9607..10083
|
Small subunit of phenylpropionate dioxygenase n=2 Tax=Burkholderia RepID=J2H9X7_9BURK
Putative terephthalate 1,2-dioxygenase, small subunit {ECO:0000313|EMBL:EIM95222.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderi
terephthalate 1,2-dioxygenase oxygenase component beta chain
|
|
SCNpilot_expt_300_bf_scaffold_301_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10090..11031
|
tpaC; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Terephthalate dihydrodiol dehydrogenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QQD5_9BURK
4-hydroxythreonine-4-phosphate dehydrogenase
|
|
SCNpilot_expt_300_bf_scaffold_301_15
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11028..11858
|
2-hydroxy-6-oxo-2,4-heptadienoate hydrolase {ECO:0000313|EMBL:CDX33173.1}; EC=3.1.1.- {ECO:0000313|EMBL:CDX33173.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Alpha/beta hydrolase fold protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3K3_THECD
alpha/beta hydrolase fold protein
|
|
SCNpilot_expt_300_bf_scaffold_301_16
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11855..12769
|
Dihydroxy naphthalene/biphenyl dioxygenase n=3 Tax=Sphingomonadaceae RepID=J8VV45_9SPHN
rbh
Naphthalene 1,2-dioxygenase {ECO:0000313|EMBL:ETI64626.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
glyoxalase/bleomycin resistance protein/dioxygenase
|
|
SCNpilot_expt_300_bf_scaffold_301_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12786..13604)
|
IclR helix-turn-helix protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A211_9PROT
IclR helix-turn-helix protein {ECO:0000313|EMBL:EHL99945.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;"
transcriptional regulatory protein
|
|
SCNpilot_expt_300_bf_scaffold_301_18
Sphingomonas sp. Ibu-2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13755..15047
|
Putative ibuprofen CoA dioxygenase large subunit n=1 Tax=Sphingomonas sp. Ibu-2 RepID=A1E031_9SPHN
rbh
Putative ibuprofen CoA dioxygenase large subunit {ECO:0000313|EMBL:ABK92277.1}; TaxID=412900 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
putative dioxygenase hydroxylase component subunit alpha
|
|
SCNpilot_expt_300_bf_scaffold_301_19
Sphingomonas sp. Ibu-2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15044..15577
|
Putative ibuprofen-CoA dioxygenase small subunit n=1 Tax=Sphingomonas sp. Ibu-2 RepID=A1E030_9SPHN
Putative ibuprofen-CoA dioxygenase small subunit {ECO:0000313|EMBL:ABK92276.1}; TaxID=412900 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
putative dioxygenase component subunit beta
|
|
SCNpilot_expt_300_bf_scaffold_301_20
Sphingomonas sp. Ibu-2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15592..17178
|
Ibuprofen CoA ligase n=1 Tax=Sphingomonas sp. Ibu-2 RepID=A1E027_9SPHN
rbh
Ibuprofen CoA ligase {ECO:0000313|EMBL:ABK92273.1}; TaxID=412900 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. I
AMP-dependent synthetase and ligase
|
|
SCNpilot_expt_300_bf_scaffold_301_21
Sphingomonas sp. Ibu-2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17175..18356
|
Putative thiolase/acyl transferase n=1 Tax=Sphingomonas sp. Ibu-2 RepID=A1E029_9SPHN
Putative thiolase/acyl transferase {ECO:0000313|EMBL:ABK92275.1}; TaxID=412900 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphi
putative thiolase
|
|
SCNpilot_expt_300_bf_scaffold_301_22
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18364..18771
|
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTZ6_PSEUP
hypothetical protein
DNA-binding protein {ECO:0000313|EMBL:KJC49344.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LT
|
|
SCNpilot_expt_300_bf_scaffold_301_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18796..19767
|
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D28DC
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_301_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20360..21265)
|
LysR-family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJD8_9BURK
LysR-family transcriptional regulator {ECO:0000313|EMBL:EIK89328.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr
LysR family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_301_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21367..23037
|
Putative monooxygenase, FAD-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJD7_9BURK
rbh
Putative monooxygenase, FAD-binding protein {ECO:0000313|EMBL:EIK89327.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source
putative FAD-binding monooxygenase
|
|
SCNpilot_expt_300_bf_scaffold_301_26
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23034..24014
|
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJD6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89326.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_301_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24096..24527
|
Transcriptional regulator, MarR family n=2 Tax=Variovorax paradoxus RepID=C5CXA5_VARPS
MarR family transcriptional regulator
Putative homoprotocatechuate degradative operon repressor HapR {ECO:0000313|EMBL:AGU47430.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari
|
|
SCNpilot_expt_300_bf_scaffold_301_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24524..25174
|
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXA4_VARPS
Variovorax paradoxus strain MEDvA23 contig_24, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33041.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
fumarylacetoacetate (FAA) hydrolase
|
|
SCNpilot_expt_300_bf_scaffold_301_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25171..25920
|
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 (EC:5.3.3.10)
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit {ECO:0000313|EMBL:ACS16907.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ACS16907.1};; TaxID=543728 species="Bacteria; Proteob
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXA3_VARPS
|
|
SCNpilot_expt_300_bf_scaffold_301_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25917..27383
|
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CG37_9BURK
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:EJL70974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
5-carboxymethyL-2-hydroxymuconate semialdehyde dehydrogenase
|