ggKbase home page

SCNpilot_expt_300_bf_scaffold_2350

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2350_1
unknown

Not on your lists

comp(203..406)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2350_2
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1322..1576
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI00037E4141
plasmid stability protein-like protein
Plasmid stability protein, putative {ECO:0000313|EMBL:ACK77928.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;"
SCNpilot_expt_300_bf_scaffold_2350_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1576..1998
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKV0_9GAMM
vapC4; nucleic acid-binding protein
SCNpilot_expt_300_bf_scaffold_2350_4
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1995..2606
DNA (612bp) protein (204aa)
DNA invertase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IW19_9SPHN
DNA invertase {ECO:0000313|EMBL:EQB16050.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium linda
invertase/recombinase protein
SCNpilot_expt_300_bf_scaffold_2350_5
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2887..3222
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J280_9SPHN
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
putative single-strand binding protein/primosomal replication protein
SCNpilot_expt_300_bf_scaffold_2350_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3470..4153
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IW37_9SPHN rbh
Chromosome partitioning protein {ECO:0000313|EMBL:EZP56485.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
chromosome partitioning ATPase
SCNpilot_expt_300_bf_scaffold_2350_7
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4150..4485
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HI90_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB16066.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
SCNpilot_expt_300_bf_scaffold_2350_8
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4880..5278)
DNA (399bp) protein (133aa)
Transposase of ISMex15, IS5 family (ORF 1) n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H3Y2_9RHIZ
Putative transposase {ECO:0000313|EMBL:KDA00352.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis S
putative transposase
Displaying 8 items

View Taxonomy