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SCNpilot_expt_300_bf_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 777 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_9_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..186)
DNA (186bp) protein (62aa)
Electron transfer flavodomain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WY04_9SPHN
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:GAM01058.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" so
electron transfer flavoprotein subunit beta
SCNpilot_expt_300_bf_scaffold_9_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225..1016)
DNA (792bp) protein (264aa)
enoyl-CoA hydratase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B36988
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:GAD48408.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
enoyl-CoA hydratase PaaG
SCNpilot_expt_300_bf_scaffold_9_3
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1016..2206)
DNA (1191bp) protein (397aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KKC26123.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KKC26123.1};; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
beta-ketothiolase (EC:2.3.1.9) rbh
3-ketoacyl-CoA thiolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B43CF1
SCNpilot_expt_300_bf_scaffold_9_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2383..3354
DNA (972bp) protein (324aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XP21_PSEMY
alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABP83087.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
SCNpilot_expt_300_bf_scaffold_9_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3351..4685)
DNA (1335bp) protein (445aa)
Aryl-beta-glucosidase {ECO:0000313|EMBL:ABD25234.1}; EC=3.2.1.21 {ECO:0000313|EMBL:ABD25234.1};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
Aryl-beta-glucosidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA89_NOVAD rbh
glycoside hydrolase
SCNpilot_expt_300_bf_scaffold_9_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4682..5068)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAG7_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25156.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
SCNpilot_expt_300_bf_scaffold_9_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5073..5972)
DNA (900bp) protein (300aa)
Esterase/lipase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA90_NOVAD rbh
Esterase/lipase-like protein {ECO:0000313|EMBL:KHS41625.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
esterase/lipase-like
SCNpilot_expt_300_bf_scaffold_9_8
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5969..6964)
DNA (996bp) protein (332aa)
Xylose isomerase-like TIM barrel n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDJ5_9SPHN rbh
xylose isomerase-like TIM barrel domain-containing protein
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:CCA90370.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
SCNpilot_expt_300_bf_scaffold_9_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6969..8177)
DNA (1209bp) protein (403aa)
Major facilitator superfamily MFS_1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAG5_NOVAD rbh
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD25158.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
SCNpilot_expt_300_bf_scaffold_9_10
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8709..10922
DNA (2214bp) protein (738aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B32A15 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB08031.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor
SCNpilot_expt_300_bf_scaffold_9_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11037..11945
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G901_NOVAD rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHS42629.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
LysR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_9_12
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12088..13203
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDL8_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA90393.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
SCNpilot_expt_300_bf_scaffold_9_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13220..14122
DNA (903bp) protein (301aa)
glyoxalase n=1 Tax=Sphingomonas elodea RepID=UPI000263104E rbh
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KHS47021.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_300_bf_scaffold_9_14
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14122..14565
DNA (444bp) protein (148aa)
SnoaL-like polyketide cyclase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WX51_9SPHN
DNA, contig: SP630 {ECO:0000313|EMBL:GAN13982.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_expt_300_bf_scaffold_9_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14580..15737
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAG2_NOVAD rbh
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein {ECO:0000313|EMBL:KHS47020.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
hypothetical protein
SCNpilot_expt_300_bf_scaffold_9_16
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15734..16525
DNA (792bp) protein (264aa)
cyclase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B45E9B rbh
ScaffoldA23, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29449.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
cyclase
SCNpilot_expt_300_bf_scaffold_9_17
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16528..17490
DNA (963bp) protein (321aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EG67_9SPHN rbh
ScaffoldA23, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29463.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
fumarylacetoacetate hydrolase
SCNpilot_expt_300_bf_scaffold_9_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17487..18266)
DNA (780bp) protein (260aa)
DeoR family transcripitonal regulator n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H2V1_9SPHN rbh
DeoR family transcripitonal regulator {ECO:0000313|EMBL:EZP74019.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp
DeoR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_9_19
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18365..19423)
DNA (1059bp) protein (353aa)
sugar:proton symporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B738D1 rbh
Rhamnose-proton symporter {ECO:0000313|EMBL:KHS48255.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
rhamnose-proton symporter
SCNpilot_expt_300_bf_scaffold_9_20
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19447..20586)
DNA (1140bp) protein (380aa)
L-lactate dehydrogenase {ECO:0000313|EMBL:KFG91043.1}; EC=1.1.2.3 {ECO:0000313|EMBL:KFG91043.1};; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
L-lactate dehydrogenase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HSJ8_9SPHN rbh
SCNpilot_expt_300_bf_scaffold_9_21
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20586..21962)
DNA (1377bp) protein (459aa)
Carbohydrate kinase, FGGY n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9H7_NOVAD rbh
carbohydrate kinase
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:ABD25496.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
SCNpilot_expt_300_bf_scaffold_9_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22202..24295
DNA (2094bp) protein (698aa)
short-chain dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B34E47 rbh
Short chain dehydrogenase {ECO:0000313|EMBL:KHS46778.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
short chain dehydrogenase
SCNpilot_expt_300_bf_scaffold_9_23
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24318..25610
DNA (1293bp) protein (431aa)
Xylose isomerase-like TIM barrel n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7K7_NOVAD rbh
xylose isomerase-like TIM barrel domain-containing protein
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:ABD26166.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
SCNpilot_expt_300_bf_scaffold_9_24
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25747..29175
DNA (3429bp) protein (1143aa)
Glycoside hydrolase family 2, sugar binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7K6_NOVAD rbh
Glycoside hydrolase family 2, sugar binding protein {ECO:0000313|EMBL:ABD26167.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
glycoside hydrolase
SCNpilot_expt_300_bf_scaffold_9_25
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29172..29633
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAG1_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS47019.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
SCNpilot_expt_300_bf_scaffold_9_26
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29655..30551
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MG36_9SPHN rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCW15704.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="
LysR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_9_27
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30646..31875
DNA (1230bp) protein (410aa)
Amidohydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEB1_NOVAD rbh
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ABP64272.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aroma
SCNpilot_expt_300_bf_scaffold_9_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31882..33363
DNA (1482bp) protein (494aa)
Monooxygenase, FAD-binding n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEB2_NOVAD rbh
monooxygenase, FAD-binding
Monooxygenase, FAD-binding {ECO:0000313|EMBL:ABP64273.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
SCNpilot_expt_300_bf_scaffold_9_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33360..33767
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEB3_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS46115.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
SCNpilot_expt_300_bf_scaffold_9_30
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33782..34720
DNA (939bp) protein (313aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEB4_NOVAD rbh
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABP64275.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
Displaying items 1-30 of 777 in total

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