name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_62_1
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2144..2905)
|
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C8EA
Uncharacterized protein {ECO:0000313|EMBL:EQB04986.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
replication protein A
|
|
SCNpilot_expt_300_bf_scaffold_62_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3193..5499)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000376C02A
TonB-dependent receptor {ECO:0000313|EMBL:GAO55581.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor
|
|
SCNpilot_expt_300_bf_scaffold_62_3
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5773..7263)
|
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MM91_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCW16603.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_62_4
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7336..7740)
|
dethiobiotin synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B516E6
Bacteriophytochrome cph2 {ECO:0000313|EMBL:EXI79034.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
|
|
SCNpilot_expt_300_bf_scaffold_62_5
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7694..9295)
|
dethiobiotin synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B516E6
rbh
Uncharacterized protein {ECO:0000313|EMBL:EAV45968.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata
diguanylate cyclase/phosphodiesterase
|
|
SCNpilot_expt_300_bf_scaffold_62_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9492..11966)
|
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B551ED
rbh
TonB-dependent receptor {ECO:0000313|EMBL:GAO53433.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor
|
|
SCNpilot_expt_300_bf_scaffold_62_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12195..13574)
|
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDX8_9SPHN
rbh
Sensor histidine kinase {ECO:0000313|EMBL:GAO53431.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_62_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13562..14248)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003609B5F
Sphingomonas taxi strain 30a NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29681.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
two component transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_62_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14415..15416
|
LacI family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN45_9SPHN
rbh
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:BAK65493.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
|
|
SCNpilot_expt_300_bf_scaffold_62_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15674..16297)
|
TadE-like protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7P8_9SPHN
pilus assembly protein TadE
TadE-like protein {ECO:0000313|EMBL:EHJ62541.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium p
|
|
SCNpilot_expt_300_bf_scaffold_62_11
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16294..16881)
|
TadE-like n=2 Tax=Novosphingobium RepID=F6INE4_9SPHN
Pilus assembly protein TadE {ECO:0000313|EMBL:KHK92036.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
TadE-like protein
|
|
SCNpilot_expt_300_bf_scaffold_62_12
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16881..18797)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5D8_NOVAD
rbh
Flp pilus assembly protein TadG {ECO:0000313|EMBL:KHS45621.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_62_13
unknown
|
Not on your lists |
19077..19448
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_62_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19584..20786)
|
membrane protein n=2 Tax=Caulobacter RepID=UPI0003688C50
rbh
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:EJL30669.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulob
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_62_15
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20843..22327)
|
Major facilitator transporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INE6_9SPHN
rbh
major facilitator superfamily transporter
Major facilitator transporter {ECO:0000313|EMBL:CCA92948.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
|
|
SCNpilot_expt_300_bf_scaffold_62_16
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22524..23558)
|
LacI family transcriptional regulator n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IM88_9SPHN
rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EQB12885.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
LacI family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_62_17
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23798..26590
|
outer membrane insertion C-terminal signal n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5D6A4
rbh
TonB-dependent receptor {ECO:0000313|EMBL:EJK82751.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
signal protein
|
|
SCNpilot_expt_300_bf_scaffold_62_18
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26663..28183
|
tryptophan halogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2E953
rbh
Tryptophan halogenase {ECO:0000313|EMBL:EZP56977.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
tryptophan halogenase
|
|
SCNpilot_expt_300_bf_scaffold_62_19
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28198..29979
|
UPI0003D5F14D related cluster n=1 Tax=unknown RepID=UPI0003D5F14D
rbh
Alpha-amylase {ECO:0000313|EMBL:ETI63183.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
alpha-amylase
|
|
SCNpilot_expt_300_bf_scaffold_62_20
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29992..31596
|
alpha-glucosidase (EC:3.2.1.20)
Alpha-amylase family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAZ8_9SPHN
rbh
Alpha-amylase family protein {ECO:0000313|EMBL:EGD58224.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
|
|
SCNpilot_expt_300_bf_scaffold_62_21
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31626..33674
|
alpha-glucosidase (EC:3.2.1.20)
Alpha-glucosidase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAZ9_9SPHN
rbh
Alpha-glucosidase {ECO:0000313|EMBL:EGD58223.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium ni
|
|
SCNpilot_expt_300_bf_scaffold_62_22
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33721..34797
|
pyridoxal-5'-phosphate-dependent protein subunit beta; K01738 cysteine synthase A [EC:2.5.1.47] Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
cysteine synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B74A5A
rbh
pyridoxal-5'-phosphate-dependent protein subunit beta
|
|
SCNpilot_expt_300_bf_scaffold_62_23
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34832..36838
|
Oligopeptidase A {ECO:0000313|EMBL:CCW16390.1}; EC=3.4.24.70 {ECO:0000313|EMBL:CCW16390.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002D860EA
rbh
oligopeptidase A
|
|
SCNpilot_expt_300_bf_scaffold_62_24
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36904..37917
|
(S)-2-hydroxy-acid oxidase (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BB43_PARDP
FMN-dependent alpha-hydroxy acid dehydrogenase
|
|
SCNpilot_expt_300_bf_scaffold_62_25
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37919..38602
|
PKHD-type hydroxylase C664_18854 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;
PKHD-type hydroxylase C664_18854 n=1 Tax=Thauera sp. 63 RepID=N6WZP4_9RHOO
putative hydroxylase
|
|
SCNpilot_expt_300_bf_scaffold_62_26
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38622..39263
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZB26_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD58107.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_62_27
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39363..40532
|
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037973E1
rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS42958.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_62_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40643..42583
|
potassium transporter Kup n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B30529
rbh
K+ potassium transporter
Probable potassium transport system protein kup 2 {ECO:0000255|HAMAP-Rule:MF_01522}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
|
|
SCNpilot_expt_300_bf_scaffold_62_29
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
42602..43999
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G871_NOVAD
rbh
periplasmic sensor signal transduction histidine kinase
|
|
SCNpilot_expt_300_bf_scaffold_62_30
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
43996..44670
|
Fis family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039A8A76
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD25951.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
|