ggKbase home page

SCNpilot_expt_300_bf_scaffold_139_2

Organism: SCNPILOT_EXPT_300_BF_Novosphingobium_63_58

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 846..3968

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraN n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000368921F similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 536.0
  • Bit_score: 448
  • Evalue 2.40e-122
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 999.99
  • Bit_score: 532
  • Evalue 3.60e-148
Uncharacterized protein {ECO:0000313|EMBL:AJA11615.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 999.99
  • Bit_score: 532
  • Evalue 1.80e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3123
ATGAGTCGGGCGCGCCGCACCATCGCTCTGGCCGCGCTGCTGGCCTGGGTCAGCGCGCAGGGCCAGGCTCTGGGCCAGATACAAGGTCAACCGCAAAGCCAGGCGCAGAATGTCAGTGCGGCCAAAGAGGTCGCGAGCGCGCTCGGACAAAATCTGCAAGGCGCGATCACCTCGGGCGTCACCAATGGTGACGCGCCAAATTCCGTGCCTACCTATCAGGGCAGCGATCTGCCCCAGACGAGCTATTATGACGCGCCCGACCAGCTGGCGAGCGCCGGGGCCACCGCCTCGCTCACCAGTGTCGGCGTGGCGCTCACCACCAACCCCAATCGGCCGAGCTTTGATAGCTCGACCATCGATCTCACCAATGCCAAAGCCATCGAGGCCGCGCCCGCCAATTATGCCGGCGGCACAGGCGCCGGGGGCACCGCAGGGAAATGCGAACCGCTGCCCGCCACCAGCGGGACGAGCAGCACGTATTATGATTCCTGCCAGATCGGTCAGGCCGAGAGCGATGTCACTTTCACCTGCCATGTCGGCTGGAAGCCGCAGCTCGCCACCAGCTATGAGTATCAGTGCCACACCAAATGGCTGACCTTGAACACCATGCCATTCGCCCAGGCGAGCGATTGCGGCGATTTTCCTGTCACCGCGACCTGCACCAGGATCGCCACGCAGGATAATGCGCTCGGCAATGCCGGCGGGGCGAGCGGCTGGGGTCTCAACTGGACGGTGCGCCAGAGCGATGACACCTATCGCTGCTCGGCCCCGGGCAATCTGGGCAGCGGCGCCTCCAACATGTTTGCCATCAACAACACCAGCTATCAGATGGAAAGCCCGCTTGGCGTCACCGGGGTTTCGGGCGCCCTGCTGCTCGGCACAAGCCAGACCGAGAGCGGCAGCGCGCTCGACACCAGCGATTGCGACAGCAAGATCGGCAGCGCCTTTTGCCCGGACGGTTCGACGCTGAGTGATGGGAGCTGCGTGGTCTCCACTCCGGCGGTCACCCGTCTGACCTGTCCGACGGGCTGGACCCTGGTCGGCGAGACCTGCCAGATCACCAAAGGGAGCGATGCTGCCATTGCCGCTTACGCTTGCGAGGGCGATGCCACGCTTGTCGGCAGCGAATGCCTTGCATCATCCCCTGCTCATATAGTGGGCTATGCCTGCCCTGATGGCTATGATCTTCATGGCACGACCTGCACGCGGGTGATCACGGCGGCGTCCAGCCTTGGTGGCTACAGTTGTCCGGCTGGTCAGACGCTCTCGGGGAGCAACTGCCTCTATGCCGCCTCTTCAGCGCCTGCCACCAGCTACAGCTGTCCCTCGGGCTGGAATCTCGACGGCACGCTCTGCACCCAGGCCTCCTCCTATGGTGCGAGCCTTGTCTATAGCTGCCCGAATGGCGGGACACTCGATGGGAGCAGCTGCGTAAGCCAGGCGGCGAGCCCGGCGACCAGCACCCAGGATTGCGGGACCACCTCCCTGCAGATGGTGGGTGGTTTCTGCGTCGGCAGCGTCGCGAGCTTTTCGAACTGCTCGGCGATTGCGGGTAATCTGACCCTCGACCACAAAGAGTTTGTCACCTCGCTCACAGGCTACACGGTCAATCTGTGGTTCTGCTATTTCAGGCCGCATGTGACCTATAGCTGCAGCGCCGGGAGCCTCTCGGGTGACCAGTGCCTGACCCCCGCCGCCAGCGCGGCCAGCAGCGCCTATGCCTGCCCCTCGGGCGGCACGCTTGTCGGCAGCAGCTGCAACAGCACCGCCACTCAGAACGCCGCACTGATCCAGACCTGCCCCGACGGTACCAACCTTGATGGCGGTCTTTGTTGGCAGACCTTGAGCGAACCGGCTGCGATCAGCTGGACCTGTCCGGCAGGCTACGCGCTCACCGGGTCCCTCTGCAGCGTCACCGAAACGATCGCCGCCACGCCGACCTATGCCTGCGATGCTGGCGCGACGCTGATGGACAACCAGTGCCATACCACCAGCGCGGCGCTGCCCGCTGCCTATGCCTGTCCGGAGGGCGCGAAGCTCGCGGGCAATATCTGCCTGCAGGGTGGCAGCACCATGCCTGCCGTCACCTATCTTTGTGCGGCGGGGCAAATCCTTTCCGGCTCCAACTGCCTCACCTATACAGCCCCGCTCACCACGCAGGGTATGAGCTGCACCGAGCCGGTCGAAACCTGCGTCGATGCTTCGCCGACCACGCGCGAGGTCGGCGGGGTTCCCGTCACCCGCTCGTGCTGGGCCTGGGAGCGGAGCTATCAATGCGCCAAGCTGACCAGCGCCAATGACTGCGGCGAGCTCGAGGCCAAGCCCAATTGCCATCTCGATCATGAGATCTGCCTCGATGAGGCTTGCCAGACCAAAAGCCGGGTTTTTCAATGCACCACGCCGGCGGGGCCTGCGAGTGGTGAGACCTATGCCTGCAGCGGCGACATCTATTGTCTCAATGGCGACTGCACCCAGGTCAAACGCGAGGCCTCGCCCGATTTTGCCCAGGCGCTGACCGCGATCCATGCGATGGGCGATGCCACCGGTCAGTTCGATGAGAACAGCCTCGAGCTCTTCGGCGGCACGGCCGAGGGCTGTCACAAGCCGCTCTTTGGCCTCATCAATTGCTGCGCGGGCAAAAGCACCGGGCTGATTGCGGCGGCCAGCGGCGCGGCGGCGCTGGCCGCGGGTCCGGGCTCGGCGCTCTTTGCCGGTCTGGTGACGCCGCTCCTCACCCAGTTCCTTTGTTCGAGCGAGGAGAAGCTCCTCGATGTGAAAGACCGGATGGGTCAGTGTCACTATATCGGGGAATATTGCTCGCAAAAGCTGCTCTTCGTCTGCGGTTCGATCCGCAAAAATTATTGCTGCTATGAGAGCAAGCTTGCCCGGCTGATCCAGGAGCAGGGCCGCGTCCAGCTCGGCAAGGGCTGGGGCAGCGCCAAATCGCCCTCCTGCAGCGGCTTTACGGTCGAGGAGTTCTCCCGGCTTGATCTCTCCAAAATGGATTTCTCGGAAATCTACGCCGATTTTACCAGCGCGGTCTCCGTCCCCGCCTCGATCTCCAATTCACTTCAGATCCAAAGCCGGATCGAGGCCTTTTACCAGGCCCATCAGGGAAGCTAG
PROTEIN sequence
Length: 1041
MSRARRTIALAALLAWVSAQGQALGQIQGQPQSQAQNVSAAKEVASALGQNLQGAITSGVTNGDAPNSVPTYQGSDLPQTSYYDAPDQLASAGATASLTSVGVALTTNPNRPSFDSSTIDLTNAKAIEAAPANYAGGTGAGGTAGKCEPLPATSGTSSTYYDSCQIGQAESDVTFTCHVGWKPQLATSYEYQCHTKWLTLNTMPFAQASDCGDFPVTATCTRIATQDNALGNAGGASGWGLNWTVRQSDDTYRCSAPGNLGSGASNMFAINNTSYQMESPLGVTGVSGALLLGTSQTESGSALDTSDCDSKIGSAFCPDGSTLSDGSCVVSTPAVTRLTCPTGWTLVGETCQITKGSDAAIAAYACEGDATLVGSECLASSPAHIVGYACPDGYDLHGTTCTRVITAASSLGGYSCPAGQTLSGSNCLYAASSAPATSYSCPSGWNLDGTLCTQASSYGASLVYSCPNGGTLDGSSCVSQAASPATSTQDCGTTSLQMVGGFCVGSVASFSNCSAIAGNLTLDHKEFVTSLTGYTVNLWFCYFRPHVTYSCSAGSLSGDQCLTPAASAASSAYACPSGGTLVGSSCNSTATQNAALIQTCPDGTNLDGGLCWQTLSEPAAISWTCPAGYALTGSLCSVTETIAATPTYACDAGATLMDNQCHTTSAALPAAYACPEGAKLAGNICLQGGSTMPAVTYLCAAGQILSGSNCLTYTAPLTTQGMSCTEPVETCVDASPTTREVGGVPVTRSCWAWERSYQCAKLTSANDCGELEAKPNCHLDHEICLDEACQTKSRVFQCTTPAGPASGETYACSGDIYCLNGDCTQVKREASPDFAQALTAIHAMGDATGQFDENSLELFGGTAEGCHKPLFGLINCCAGKSTGLIAAASGAAALAAGPGSALFAGLVTPLLTQFLCSSEEKLLDVKDRMGQCHYIGEYCSQKLLFVCGSIRKNYCCYESKLARLIQEQGRVQLGKGWGSAKSPSCSGFTVEEFSRLDLSKMDFSEIYADFTSAVSVPASISNSLQIQSRIEAFYQAHQGS*