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SCNpilot_expt_300_bf_scaffold_641

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_641_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411..869)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8NBT4_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD20418.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_expt_300_bf_scaffold_641_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(869..1186)
DNA (318bp) protein (106aa)
AbrB family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5ARQ1_PSEAI
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:AFU56922.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcali
SCNpilot_expt_300_bf_scaffold_641_3
unknown

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1361..1549
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_641_4
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1628..3910)
DNA (2283bp) protein (761aa)
Silver exporting P-type ATPase {ECO:0000313|EMBL:EWS55971.1}; EC=3.6.3.53 {ECO:0000313|EMBL:EWS55971.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylib
Copper-transporting P-type ATPase n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00035E502E rbh
heavy metal translocating p-type ATPase
SCNpilot_expt_300_bf_scaffold_641_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4014..4262)
DNA (249bp) protein (83aa)
Copper-transporting P-type ATPase {ECO:0000313|EMBL:EWS60508.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EWS60508.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methyl
Chaperonin n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGB4_METPP
copZ; chaperonin
SCNpilot_expt_300_bf_scaffold_641_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4360..4992)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRP4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89885.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
SCNpilot_expt_300_bf_scaffold_641_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5060..6328)
DNA (1269bp) protein (423aa)
Peptidase M20D, amidohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI2_9GAMM
Peptidase M20D, amidohydrolase {ECO:0000313|EMBL:EIL97523.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
amidohydrolase
SCNpilot_expt_300_bf_scaffold_641_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6815..9064
DNA (2250bp) protein (750aa)
hypothetical protein id=12494348 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ98082.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
hypothetical protein
SCNpilot_expt_300_bf_scaffold_641_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9095..10153
DNA (1059bp) protein (353aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] id=12494347 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=GWE1_Thiobacillus_62_9_curated
A/G-specific adenine glycosylase (EC:3.2.2.-)
SCNpilot_expt_300_bf_scaffold_641_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10230..10655
DNA (426bp) protein (142aa)
hypothetical protein id=12494346 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_641_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10624..11820
DNA (1197bp) protein (399aa)
hypothetical protein id=12494345 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_641_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11824..14568
DNA (2745bp) protein (915aa)
diguanylate cyclase/phosphodiesterase id=12494344 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
PAS sensor diguanylate cyclase/phosphodiesterase Tax=GWE1_Thiobacillus_62_9_curated
diguanylate cyclase/phosphodiesterase
SCNpilot_expt_300_bf_scaffold_641_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14622..14945
DNA (324bp) protein (108aa)
putative dissimilatory sulfite reductase id=12494343 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative dissimilatory sulfite reductase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dissimilatory sulfite reductase
SCNpilot_expt_300_bf_scaffold_641_14
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15055..15126
DNA (72bp) protein (24aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CDM25340.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CDM25340.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Displaying 14 items

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