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SCNpilot_expt_300_bf_scaffold_422

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_422_1
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..101
DNA (99bp) protein (33aa)
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TRW5_ACIAC
dehydrogenase
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:BAO91933.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" s
SCNpilot_expt_300_bf_scaffold_422_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

340..1308
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1S6_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV00065.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_422_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1391..2278
DNA (888bp) protein (296aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8U1S7_ALIDB rbh
ABC transporter permease rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB84883.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" so
SCNpilot_expt_300_bf_scaffold_422_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2291..3085
DNA (795bp) protein (265aa)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEB84884.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEB84884.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1S8_ALIDB rbh
ABC transporter rbh
SCNpilot_expt_300_bf_scaffold_422_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3260..5185)
DNA (1926bp) protein (642aa)
Sigma-54 factor interaction domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1S9_ALIDB rbh
Fis family sigma-54 specific transcriptional regulator with PAS/PAC sensor rbh
Fis family sigma-54 specific transcriptional regulator {ECO:0000313|EMBL:GAO23232.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphil
SCNpilot_expt_300_bf_scaffold_422_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5297..6172)
DNA (876bp) protein (292aa)
Alpha/beta hydrolase fold protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T0_ALIDB rbh
alpha/beta fold family hydrolase rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEB84886.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
SCNpilot_expt_300_bf_scaffold_422_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6186..7766)
DNA (1581bp) protein (527aa)
gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3) rbh
Gluconate 2-dehydrogenase (Acceptor) n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T1_ALIDB rbh
Gluconate 2-dehydrogenase {ECO:0000313|EMBL:GAO23230.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_expt_300_bf_scaffold_422_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7799..8380)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1T2_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV00071.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_422_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8437..9150)
DNA (714bp) protein (238aa)
Biotin/lipoate A/B protein ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T3_ALIDB rbh
biotin/lipoate A/B protein ligase rbh
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:AEB84889.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
SCNpilot_expt_300_bf_scaffold_422_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9159..9860)
DNA (702bp) protein (234aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12) rbh
Dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:AEB84890.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AEB84890.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Dihydrolipoyllysine-residue acetyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T4_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_422_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9857..10102)
DNA (246bp) protein (82aa)
Biotin/lipoyl attachment domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T5_ALIDB
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:GAO23226.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;
SCNpilot_expt_300_bf_scaffold_422_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10099..11136)
DNA (1038bp) protein (346aa)
Transketolase central region protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T6_ALIDB rbh
transketolase central region protein rbh
Pyruvate dehydrogenase {ECO:0000313|EMBL:GAO23225.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
SCNpilot_expt_300_bf_scaffold_422_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11162..12169)
DNA (1008bp) protein (336aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1) rbh
Pyruvate dehydrogenase (Acetyl-transferring) n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T7_ALIDB rbh
Pyruvate dehydrogenase {ECO:0000313|EMBL:GAO23224.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
SCNpilot_expt_300_bf_scaffold_422_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12505..12966)
DNA (462bp) protein (154aa)
Transcription regulator AsnC-type-like protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T8_ALIDB
transcription regulator asnc-type-like protein
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEB84894.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_expt_300_bf_scaffold_422_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13252..14223
DNA (972bp) protein (324aa)
TRAP dicarboxylate transporter, DctP subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U1T9_ALIDB rbh
trap dicarboxylate transporter subunit DctP rbh
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:GAO23222.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
SCNpilot_expt_300_bf_scaffold_422_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14299..14793
DNA (495bp) protein (165aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=2 Tax=Alicycliphilus denitrificans RepID=E8U1U0_ALIDB rbh
tripartite ATP-independent periplasmic transporter dctq component rbh
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADV00079.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_expt_300_bf_scaffold_422_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14790..16067
DNA (1278bp) protein (426aa)
TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U1U1_ALIDB rbh
trap dicarboxylate transporter subunit DctM rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:GAO23220.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
SCNpilot_expt_300_bf_scaffold_422_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16089..17156)
DNA (1068bp) protein (356aa)
Metallo-beta-lactamase family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1U2_ALIDB rbh
metallo-beta-lactamase family protein rbh
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ADV00081.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
SCNpilot_expt_300_bf_scaffold_422_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17487..18620
DNA (1134bp) protein (378aa)
glycine cleavage system T protein (EC:2.1.2.10) rbh
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Aminomethyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1U3_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_422_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18707..19081
DNA (375bp) protein (125aa)
Glycine cleavage system H protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1U4_ALIDB
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
SCNpilot_expt_300_bf_scaffold_422_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19149..22034
DNA (2886bp) protein (962aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
Glycine dehydrogenase (decarboxylating) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE07_ALIDK rbh
glycine dehydrogenase rbh
SCNpilot_expt_300_bf_scaffold_422_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22191..22451
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1U6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84902.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_422_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22475..23590
DNA (1116bp) protein (372aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1U7_ALIDB rbh
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase rbh
SCNpilot_expt_300_bf_scaffold_422_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23700..24560
DNA (861bp) protein (287aa)
S-formylglutathione hydrolase (EC:3.1.2.12) rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:AEB84904.1}; EC=3.1.2.12 {ECO:0000313|EMBL:AEB84904.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
S-formylglutathione hydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE10_ALIDK rbh
SCNpilot_expt_300_bf_scaffold_422_25
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24597..24854)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UPC4_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER55544.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanth
SCNpilot_expt_300_bf_scaffold_422_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24927..26045)
DNA (1119bp) protein (373aa)
Radical SAM domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1V1_ALIDB rbh
radical SAM protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:AEB84907.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_expt_300_bf_scaffold_422_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26305..26712
DNA (408bp) protein (136aa)
Transcription elongation factor GreA/GreB domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1V2_ALIDB
transcription elongation factor GreA/GreB domain-containing protein
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:ADV00091.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
SCNpilot_expt_300_bf_scaffold_422_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26758..27954)
DNA (1197bp) protein (399aa)
Acyltransferase 3 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE15_ALIDK rbh
acyltransferase 3 rbh
Acyltransferase 3 {ECO:0000313|EMBL:AEB84909.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrifi
SCNpilot_expt_300_bf_scaffold_422_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28021..28977)
DNA (957bp) protein (319aa)
2-nitropropane dioxygenase NPD n=2 Tax=Alicycliphilus denitrificans RepID=E8U1V4_ALIDB rbh
2-nitropropane dioxygenase rbh
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ADV00093.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_expt_300_bf_scaffold_422_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29057..30847)
DNA (1791bp) protein (597aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1) rbh
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1V5_ALIDB rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO22058.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
Displaying items 1-30 of 32 in total

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