ggKbase home page

SCNpilot_expt_300_bf_scaffold_429

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_429_1
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..172)
DNA (171bp) protein (57aa)
prevent-host-death protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036AB9C4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX88434.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR
SCNpilot_expt_300_bf_scaffold_429_2
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(834..1637)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Pseudomonas brassicacearum (strain NFM421) RepID=F2KBV3_PSEBN
prophage
Uncharacterized protein {ECO:0000313|EMBL:AEA66885.1}; TaxID=994484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassi
SCNpilot_expt_300_bf_scaffold_429_3
Acinetobacter tjernbergiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2190..3578)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00036F54F9
Uncharacterized protein {ECO:0000313|EMBL:ESK52895.1}; TaxID=1120928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter tjer
SCNpilot_expt_300_bf_scaffold_429_4
unknown

Not on your lists

comp(3575..4684)
DNA (1110bp) protein (370aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_429_5
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4835..5086)
DNA (252bp) protein (84aa)
Phage transcriptional regulator, AlpA n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4L905_TOLAT
phage transcriptional regulator, AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:AJY51522.1}; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halom
SCNpilot_expt_300_bf_scaffold_429_6
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5197..6423)
DNA (1227bp) protein (409aa)
Putative transposase (Mutator type) n=1 Tax=Comamonas testosteroni RepID=D3VWZ7_COMTE rbh
Transposase {ECO:0000313|EMBL:EXU78450.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
transposase, mutator type
SCNpilot_expt_300_bf_scaffold_429_7
unknown

Not on your lists

comp(6429..6611)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_429_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6759..8003)
DNA (1245bp) protein (415aa)
integrase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956C9D rbh
Integrase {ECO:0000313|EMBL:KGG83090.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas test
integrase family protein
SCNpilot_expt_300_bf_scaffold_429_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8357..10207)
DNA (1851bp) protein (617aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBH2_ALIDK rbh
peptidase M14 carboxypeptidase A rbh
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AEB85817.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
SCNpilot_expt_300_bf_scaffold_429_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10308..12017)
DNA (1710bp) protein (570aa)
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
ATP-dependent RNA helicase RhlE n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBH1_ALIDK rbh
DEAD/DEAH box helicase rbh
SCNpilot_expt_300_bf_scaffold_429_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12275..13936
DNA (1662bp) protein (554aa)
ATP-binding cassette protein, ChvD family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBH0_ALIDK rbh
ChvD family ATP-binding protein rbh
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:AEB85815.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
SCNpilot_expt_300_bf_scaffold_429_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13943..14689)
DNA (747bp) protein (249aa)
TRAP transporter solute receptor TAXI family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBG9_ALIDK
TRAP transporter solute receptor TAXI family protein
TRAP transporter solute receptor TAXI family protein {ECO:0000313|EMBL:AEB85814.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.
SCNpilot_expt_300_bf_scaffold_429_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14705..15274)
DNA (570bp) protein (190aa)
TRAP transporter solute receptor TAXI family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBG9_ALIDK
TRAP transporter solute receptor TAXI family protein
Trap transporter solute receptor taxi family protein {ECO:0000313|EMBL:GAO27336.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus
SCNpilot_expt_300_bf_scaffold_429_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15281..16294)
DNA (1014bp) protein (338aa)
Peptidase S58 DmpA n=2 Tax=Alicycliphilus denitrificans RepID=E8TT54_ALIDB rbh
peptidase S58 DmpA rbh
Peptidase S58 DmpA {ECO:0000313|EMBL:AEB85813.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrif
SCNpilot_expt_300_bf_scaffold_429_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16333..16812)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT55_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU99211.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_429_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16838..17323)
DNA (486bp) protein (162aa)
Blue (Type 1) copper domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT56_ALIDB rbh
blue (type 1) copper domain-containing protein rbh
Blue copper domain-containing protein {ECO:0000313|EMBL:GAO27339.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_expt_300_bf_scaffold_429_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17424..17777)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT57_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99213.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_429_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17795..18388)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT58_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB85809.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_429_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18569..20581)
DNA (2013bp) protein (671aa)
Heavy metal translocating P-type ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT59_ALIDB rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADU99215.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
heavy metal translocating p-type atpase rbh
SCNpilot_expt_300_bf_scaffold_429_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20622..21080
DNA (459bp) protein (153aa)
Transcription regulator MerR DNA binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT60_ALIDB rbh
MerR family transcriptional regulator rbh
MerR family transcriptional regulator {ECO:0000313|EMBL:GAO27343.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_expt_300_bf_scaffold_429_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21160..21984
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBG1_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB85806.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_429_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22003..22986
DNA (984bp) protein (328aa)
Mammalian cell entry related domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT62_ALIDB rbh
mammalian cell entry related domain-containing protein rbh
Mammalian cell entry related domain protein {ECO:0000313|EMBL:AEB85805.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
SCNpilot_expt_300_bf_scaffold_429_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22983..23777
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TT63_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB85804.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_429_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23759..24592)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBF8_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU99220.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_429_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24616..26142)
DNA (1527bp) protein (509aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT65_ALIDB rbh
carbohydrate kinase rbh
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:ADU99221.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
Displaying 25 items

View Taxonomy