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SCNpilot_expt_300_bf_scaffold_431

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Displaying items 1-30 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_431_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116..586)
DNA (471bp) protein (157aa)
GCN5-related N-acetyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Y5_ALIDB
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEB86242.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
SCNpilot_expt_300_bf_scaffold_431_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(908..1750)
DNA (843bp) protein (281aa)
ATPase associated with various cellular activities AAA_5 n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Y4_ALIDB rbh
ATPase AAA rbh
AAA ATPase central domain protein {ECO:0000313|EMBL:AEB86243.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
SCNpilot_expt_300_bf_scaffold_431_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1871..2530
DNA (660bp) protein (220aa)
Cytochrome c class I n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Y3_ALIDB rbh
cytochrome c class I rbh
Cytochrome c class I {ECO:0000313|EMBL:AEB86244.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
SCNpilot_expt_300_bf_scaffold_431_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2978..3850
DNA (873bp) protein (291aa)
UspA domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Y2_ALIDB rbh
UspA domain-containing protein rbh
UspA domain-containing protein {ECO:0000313|EMBL:GAO24859.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_expt_300_bf_scaffold_431_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3785..4219)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Y1_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01234.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_431_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4242..5045)
DNA (804bp) protein (268aa)
Beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Y0_ALIDB rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEB86247.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_expt_300_bf_scaffold_431_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5148..5843
DNA (696bp) protein (232aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.6) rbh
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:ADV01232.1}; EC=2.8.3.6 {ECO:0000313|EMBL:ADV01232.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
3-oxoacid CoA-transferase, A subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X9_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_431_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5870..6514
DNA (645bp) protein (215aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.6) rbh
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:ADV01231.1}; EC=2.8.3.6 {ECO:0000313|EMBL:ADV01231.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
3-oxoacid CoA-transferase, B subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X8_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_431_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6592..7794
DNA (1203bp) protein (401aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.174) rbh
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:ADV01230.1}; EC=2.3.1.174 {ECO:0000313|EMBL:ADV01230.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
Beta-ketoadipyl CoA thiolase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X7_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_431_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7847..8572
DNA (726bp) protein (242aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X6_ALIDB rbh
short-chain dehydrogenase/reductase sdr rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV01229.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
SCNpilot_expt_300_bf_scaffold_431_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8613..9605
DNA (993bp) protein (331aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X5_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB86252.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_431_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9724..10020)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UD46_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGH31893.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
SCNpilot_expt_300_bf_scaffold_431_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10096..10815)
DNA (720bp) protein (240aa)
Intradiol ring-cleavage dioxygenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1D2_VARPS
intradiol ring-cleavage dioxygenase
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:ACS22702.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_expt_300_bf_scaffold_431_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10812..11906)
DNA (1095bp) protein (365aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00035D0351
Variovorax paradoxus strain MEDvA23 contig_99, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20098.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
inner-membrane translocator
SCNpilot_expt_300_bf_scaffold_431_15
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11919..12887)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003737A48
extra-cytoplasmic solute receptor family protein 104
Extra-cytoplasmic solute receptor family protein 104 {ECO:0000313|EMBL:ADP17528.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;
SCNpilot_expt_300_bf_scaffold_431_16
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12935..13846)
DNA (912bp) protein (304aa)
sulfatase family protein 9 (EC:3.1.6.-)
Sulfatase family protein 9 {ECO:0000313|EMBL:ADP17527.1}; EC=3.1.6.- {ECO:0000313|EMBL:ADP17527.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
Sulfatase family protein 9 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HW47_ACHXA
SCNpilot_expt_300_bf_scaffold_431_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14547..15284)
DNA (738bp) protein (246aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2JUY3_9BURK
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL71665.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
inner-membrane translocator
SCNpilot_expt_300_bf_scaffold_431_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15330..16037)
DNA (708bp) protein (236aa)
ABC transporter ATP-binding protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003627447
Variovorax paradoxus strain MEDvA23 contig_99, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20100.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
ABC transporter
SCNpilot_expt_300_bf_scaffold_431_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16040..16759)
DNA (720bp) protein (240aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2T140_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL71667.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
putative branched-chain amino acid ABC transporter, ATP-binding protein
SCNpilot_expt_300_bf_scaffold_431_20
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16786..17688)
DNA (903bp) protein (301aa)
MetA-pathway phenol degradation-like protein n=2 Tax=Burkholderia cenocepacia RepID=B1K235_BURCC rbh
MetA-pathway phenol degradation-like protein
Putative uncharacterized protein {ECO:0000313|EMBL:EAY65993.1}; TaxID=350702 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepaci
SCNpilot_expt_300_bf_scaffold_431_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17714..18967)
DNA (1254bp) protein (418aa)
Putative ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XNB6_VARPD
putative ABC transporter, branched-chain amino acid-binding protein
Putative ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU53600.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
SCNpilot_expt_300_bf_scaffold_431_22
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19024..20112)
DNA (1089bp) protein (363aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGW6_9BURK
Maleylacetate reductase {ECO:0000313|EMBL:KGY28872.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxy
iron-containing alcohol dehydrogenase
SCNpilot_expt_300_bf_scaffold_431_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20140..21075)
DNA (936bp) protein (312aa)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036E36AC rbh
putative Bug-like extra-cytoplasmic solute receptor, TTT family rbh
Putative Bug-like extra-cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU53602.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
SCNpilot_expt_300_bf_scaffold_431_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21110..22618)
DNA (1509bp) protein (503aa)
betaine-aldehyde dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036488A5 rbh
putative aldehyde dehydrogenase
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:AGU53603.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
SCNpilot_expt_300_bf_scaffold_431_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22684..23691)
DNA (1008bp) protein (336aa)
hydroquinone dioxygenase large subunit n=1 Tax=Variovorax paradoxus RepID=UPI00036B6F54
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU53604.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
SCNpilot_expt_300_bf_scaffold_431_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23736..24242)
DNA (507bp) protein (169aa)
hydroquinone dioxygenase small subunit n=1 Tax=Curvibacter lanceolatus RepID=UPI000374E8C5
Variovorax paradoxus strain MEDvA23 contig_84, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21840.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
SCNpilot_expt_300_bf_scaffold_431_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24478..25425
DNA (948bp) protein (316aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1C1_VARPS
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS22691.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
SCNpilot_expt_300_bf_scaffold_431_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25452..27323)
DNA (1872bp) protein (624aa)
Potassium efflux system protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1W2_ALIDB rbh
Potassium efflux system protein {ECO:0000313|EMBL:AEB86265.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
potassium efflux system protein rbh
SCNpilot_expt_300_bf_scaffold_431_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27441..28079
DNA (639bp) protein (213aa)
Lysine exporter protein (LYSE/YGGA) n=2 Tax=Alicycliphilus denitrificans RepID=E8U1W1_ALIDB rbh
lysine exporter protein LysE/YggA rbh
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:AEB86266.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_expt_300_bf_scaffold_431_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28160..28780
DNA (621bp) protein (207aa)
Cobyrinic acid ac-diamide synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1W0_ALIDB rbh
Cobyrinic acid ac-diamide synthase rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:AEB86267.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
Displaying items 1-30 of 194 in total

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