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SCNpilot_expt_300_bf_scaffold_540

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_540_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1077)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TPY7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98921.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_540_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1094..1582)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TPY6_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB86064.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_540_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1713..1928)
DNA (216bp) protein (72aa)
Type II secretion system protein E n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TPY5_ALIDB
type II secretion system protein e
Type II secretion system protein E {ECO:0000313|EMBL:GAO27021.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_expt_300_bf_scaffold_540_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1925..3394)
DNA (1470bp) protein (490aa)
Type II secretion system protein E n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TPY5_ALIDB
type II secretion system protein e
Type II secretion system protein E {ECO:0000313|EMBL:ADU98919.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
SCNpilot_expt_300_bf_scaffold_540_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3399..4178)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TPY4_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB86066.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_540_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4162..4689)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEA5_ALIDK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86067.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_540_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4783..6009)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI000374D34E
Uncharacterized protein {ECO:0000313|EMBL:KIJ72302.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_540_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6010..6819)
DNA (810bp) protein (270aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteri
hypothetical protein n=1 Tax=Pseudomonas RepID=UPI000368B645 rbh
DNA adenine methylase
SCNpilot_expt_300_bf_scaffold_540_9
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6943..8283
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI00036A2D2A rbh
Uncharacterized protein {ECO:0000313|EMBL:KIJ72301.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
type III restriction-modification system methyltransferase
SCNpilot_expt_300_bf_scaffold_540_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8370..9215)
DNA (846bp) protein (282aa)
TatD-related deoxyribonuclease n=2 Tax=Alicycliphilus denitrificans RepID=E8TPY2_ALIDB rbh
TatD-related deoxyribonuclease rbh
TatD-related deoxyribonuclease {ECO:0000313|EMBL:AEB86068.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_expt_300_bf_scaffold_540_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9226..9423)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TPY1_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98915.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_540_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9457..9765)
DNA (309bp) protein (103aa)
Regulatory protein ArsR n=2 Tax=Alicycliphilus denitrificans RepID=E8TPY0_ALIDB
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEB86070.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_expt_300_bf_scaffold_540_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9896..10270
DNA (375bp) protein (125aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Alkylhydroperoxidase like protein, AhpD family n=2 Tax=Alicycliphilus denitrificans RepID=E8TPX9_ALIDB
alkylhydroperoxidase
SCNpilot_expt_300_bf_scaffold_540_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10375..11274
DNA (900bp) protein (300aa)
Peptidase S1 and S6 chymotrypsin/Hap n=2 Tax=Alicycliphilus denitrificans RepID=E8TPX8_ALIDB rbh
peptidase S1 and S6 chymotrypsin/Hap rbh
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADU98912.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
SCNpilot_expt_300_bf_scaffold_540_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11289..12320
DNA (1032bp) protein (344aa)
ATPase associated with various cellular activities AAA_3 n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A7_ALIDB rbh
ATPase rbh
MoxR-like ATPase {ECO:0000313|EMBL:GAO27012.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_540_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12313..13281
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U2A6_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO27011.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_expt_300_bf_scaffold_540_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13304..14350
DNA (1047bp) protein (349aa)
von Willebrand factor type A n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A5_ALIDB rbh
von Willebrand factor type A rbh
von Willebrand factor type A {ECO:0000313|EMBL:GAO27010.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_expt_300_bf_scaffold_540_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14468..16465)
DNA (1998bp) protein (666aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
Acetyl-coenzyme A synthetase n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A4_ALIDB rbh
acetate/CoA ligase rbh
SCNpilot_expt_300_bf_scaffold_540_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17120..18424
DNA (1305bp) protein (435aa)
glycine/betaine/L-proline ABC transporter ATPase (EC:3.6.3.32) rbh
Glycine betaine/L-proline ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEB86077.1}; EC=3.6.3.32 {ECO:0000313|EMBL:AEB86077.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria;
Glycine betaine/L-proline ABC transporter, ATPase subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A3_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_540_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18421..19533
DNA (1113bp) protein (371aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A2_ALIDB rbh
ABC transporter permease rbh
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:GAO27007.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
SCNpilot_expt_300_bf_scaffold_540_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19610..20620
DNA (1011bp) protein (337aa)
Substrate-binding region of ABC-type glycine betaine transport system n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A1_ALIDB rbh
glycine/betaine ABC transporter substrate-binding protein rbh
ABC-type glycine betaine transport, periplasmic subunit {ECO:0000313|EMBL:AEB86079.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
SCNpilot_expt_300_bf_scaffold_540_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20808..21584
DNA (777bp) protein (259aa)
Cyclic nucleotide-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A0_ALIDB rbh
cyclic nucleotide-binding protein rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEB86080.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
SCNpilot_expt_300_bf_scaffold_540_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21650..24034)
DNA (2385bp) protein (795aa)
Ferrichrome-iron receptor FhuA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTQ6_RUBGI rbh
fhuA; ferrichrome-iron receptor FhuA
Ferrichrome-iron receptor FhuA {ECO:0000313|EMBL:BAL96393.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain
SCNpilot_expt_300_bf_scaffold_540_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24174..25472)
DNA (1299bp) protein (433aa)
Anti-FecI sigma factor, FecR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UV22_VARPE rbh
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADU37534.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parado
SCNpilot_expt_300_bf_scaffold_540_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25502..26029)
DNA (528bp) protein (176aa)
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1603291 species="Bacteria; Prot
Fumarate hydratase class II n=2 Tax=Alicycliphilus denitrificans RepID=E8U299_ALIDB
SCNpilot_expt_300_bf_scaffold_540_26
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26010..26828)
DNA (819bp) protein (273aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1603291 species="Bacteria; Prot
Fumarate hydratase class II n=2 Tax=Alicycliphilus denitrificans RepID=E8U299_ALIDB
fumarate hydratase, class ii
SCNpilot_expt_300_bf_scaffold_540_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26997..28556
DNA (1560bp) protein (520aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U298_ALIDB rbh
fe-s type, tartrate/fumarate subfamily hydro-lyase subunit alpha rbh
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:ADU98902.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
SCNpilot_expt_300_bf_scaffold_540_28
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28633..29256)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0K2_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER62020.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
hypothetical protein
Displaying 28 items

View Taxonomy