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SCNpilot_expt_300_bf_scaffold_401_2

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(250..1050)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport system permease n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WY73_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 266.0
  • Bit_score: 449
  • Evalue 2.10e-123
  • rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 266.0
  • Bit_score: 449
  • Evalue 3.00e-123
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 266.0
  • Bit_score: 445
  • Evalue 1.10e-122
  • rbh

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGATGACGGTTGCTAATGAACTGCACTCCGTATGGAACGCAAGAGCCCTGGTATGGGTGCTGACCCGCCGCGAGGTGGCATCCCGCCATGCGGGTACCGCGGTGGGAGTGCTCTGGCCCTATCTGCAACCCTTGCTCACGGTGGCCGCGTACTACCTCGTGTTCGACGTGGTGTTCCGCATGCGCCTGGGAGAGGGTGCCCCCACGCATGCGGTGGGTACCTTTCTGGTCGTGGGCGCCTTGCCGTGGATGGCGTTCTGCGACGCGGTGCAGCGTGGCATGACCAGCCTGATCGACGCGGGCGGCTTGCTGCACAAGAATCCGCTGCCGCCGGTACTGTTCACCACGCGCGCGGTGCTGGCTAGCGCCTTGATCTATGGCCCGTTGCTGCTGCTGGTGGCGCTGGCCTACGTGCCGGCCCATGGCCTGCGGCCGGCGGTACTGGCGCTGGTGCCGTTGCTGGGCTTGCAATTGGCGCTTTGCCTGGTGCTGGCTTATGTGCTGGCGATTCTGGCGGCCGCGCTGCGCGACGTGGTGCAGCTGGTGGGCTTTCTGCTGTCGGTGGGCATTTACCTTTCGCCCATTTTGTTCCCGCTGTCCCTGTTTCCGGAAAACTGGCGTTGGGTGCTGTGGCTCAACCCCATGACGGGGCTGGTGCAGGGCTACCAGCAGGTGCTGCTGCAGGGCGCCTGGCCGCCCGCGAGCGTGTGGTGGGTGTCGCTGGCATGGCTGGCGCTGCTGGTGCTGGCACTCAACGCGCTGGTGGCACGCAGCCGCGATCAGTTGGTGGATTGGTTATGA
PROTEIN sequence
Length: 267
MMTVANELHSVWNARALVWVLTRREVASRHAGTAVGVLWPYLQPLLTVAAYYLVFDVVFRMRLGEGAPTHAVGTFLVVGALPWMAFCDAVQRGMTSLIDAGGLLHKNPLPPVLFTTRAVLASALIYGPLLLLVALAYVPAHGLRPAVLALVPLLGLQLALCLVLAYVLAILAAALRDVVQLVGFLLSVGIYLSPILFPLSLFPENWRWVLWLNPMTGLVQGYQQVLLQGAWPPASVWWVSLAWLALLVLALNALVARSRDQLVDWL*