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SCNpilot_expt_300_bf_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_401_1
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)
teichoic-acid-transporting AtPase (EC:3.6.3.40)
Teichoic-acid-transporting ATPase {ECO:0000313|EMBL:AEF92172.1}; EC=3.6.3.40 {ECO:0000313|EMBL:AEF92172.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
Teichoic-acid-transporting ATPase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWL4_DELSC
SCNpilot_expt_300_bf_scaffold_401_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..1050)
DNA (801bp) protein (267aa)
Lipopolysaccharide transport system permease n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WY73_DELAC rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
ABC transporter rbh
SCNpilot_expt_300_bf_scaffold_401_3
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1146..2039)
DNA (894bp) protein (298aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUQ0_ACIAC rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_expt_300_bf_scaffold_401_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2130..3635)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1E4_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER61702.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
hypothetical protein
SCNpilot_expt_300_bf_scaffold_401_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3824..4237)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1E2_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61700.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
hypothetical protein
SCNpilot_expt_300_bf_scaffold_401_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4312..6738)
DNA (2427bp) protein (809aa)
General secretion pathway protein D n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q480_ACIAP rbh
general secretion pathway protein D rbh
General secretion pathway protein D {ECO:0000313|EMBL:ADX47910.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_expt_300_bf_scaffold_401_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6868..7512)
DNA (645bp) protein (215aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12549588 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_expt_300_bf_scaffold_401_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7509..8069)
DNA (561bp) protein (187aa)
general secretion pathway protein M; K02462 general secretion pathway protein M id=12552860 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
General secretion pathway protein M {ECO:0000313|EMBL:EER61697.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
general secretion pathway protein M
SCNpilot_expt_300_bf_scaffold_401_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8066..9331)
DNA (1266bp) protein (422aa)
fimbrial assembly family protein; K02461 general secretion pathway protein L id=12549590 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Fimbrial assembly family protein {ECO:0000313|EMBL:EER61696.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
fimbrial assembly family protein
SCNpilot_expt_300_bf_scaffold_401_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9343..10161)
DNA (819bp) protein (273aa)
general secretion pathway protein K n=1 Tax=Acidovorax avenae RepID=UPI000369BCBE rbh
general secretory pathway protein K rbh
General secretory pathway protein K {ECO:0000313|EMBL:ADX47914.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
SCNpilot_expt_300_bf_scaffold_401_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10206..10868)
DNA (663bp) protein (221aa)
General secretion pathway protein J n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1D6_ACIDE
General secretion pathway protein J {ECO:0000313|EMBL:EER61694.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
general secretion pathway protein J
SCNpilot_expt_300_bf_scaffold_401_12
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10865..11269)
DNA (405bp) protein (135aa)
General secretion pathway protein I n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q486_ACIAP
general secretion pathway protein I
General secretion pathway protein I {ECO:0000313|EMBL:ADX47916.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_expt_300_bf_scaffold_401_13
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..11754)
DNA (489bp) protein (163aa)
general secretion pathway protein H n=1 Tax=Acidovorax avenae RepID=UPI0002F44FCF
general secretion pathway protein H
General secretion pathway protein H {ECO:0000313|EMBL:ADX47917.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_expt_300_bf_scaffold_401_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11796..12218)
DNA (423bp) protein (141aa)
general secretion pathway protein G; K02456 general secretion pathway protein G id=12549595 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
General secretion pathway protein G {ECO:0000313|EMBL:EER61693.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
general secretion pathway protein G
SCNpilot_expt_300_bf_scaffold_401_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12247..13500)
DNA (1254bp) protein (418aa)
Type II secretion system protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1D4_ACIDE rbh
type II secretion system protein; K02455 general secretion pathway protein F Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
type II secretion system protein
SCNpilot_expt_300_bf_scaffold_401_16
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13493..15226)
DNA (1734bp) protein (578aa)
general secretory pathway protein E; K02454 general secretion pathway protein E id=12552852 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
General secretory pathway protein E {ECO:0000313|EMBL:EER61691.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
general secretory pathway protein E rbh
SCNpilot_expt_300_bf_scaffold_401_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15387..17246
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFR4_VEREI rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein rbh
SCNpilot_expt_300_bf_scaffold_401_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17297..17842)
DNA (546bp) protein (182aa)
dtdp-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) rbh
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ADU98413.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ADU98413.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY14_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_401_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17842..18732)
DNA (891bp) protein (297aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24) rbh
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5D3_ALIDK rbh
SCNpilot_expt_300_bf_scaffold_401_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18743..19621)
DNA (879bp) protein (293aa)
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133) rbh
dTDP-4-dehydrorhamnose reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY12_ALIDB rbh
dTDP-4-dehydrorhamnose reductase RfbD {ECO:0000313|EMBL:GAO22212.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_expt_300_bf_scaffold_401_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19618..20679)
DNA (1062bp) protein (354aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) rbh
dTDP-glucose 4,6-dehydratase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY11_ALIDB rbh
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:GAO26332.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_expt_300_bf_scaffold_401_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20878..21321
DNA (444bp) protein (148aa)
Poly(Hydroxyalkanoate) granule-associated protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TY10_ALIDB
poly(hydroxyalkanoate) granule-associated protein
Poly(Hydroxyalkanoate) granule-associated protein {ECO:0000313|EMBL:AEB83022.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;"
SCNpilot_expt_300_bf_scaffold_401_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21558..22235
DNA (678bp) protein (226aa)
Regulatory protein TetR n=2 Tax=Alicycliphilus denitrificans RepID=E8TY09_ALIDB rbh
TetR family transcriptional regulator rbh
Regulatory protein TetR {ECO:0000313|EMBL:AEB83021.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_401_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22232..23008)
DNA (777bp) protein (259aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY08_ALIDB rbh
Baf family transcriptional activator rbh
SCNpilot_expt_300_bf_scaffold_401_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23155..23643
DNA (489bp) protein (163aa)
Peptidoglycan-binding lysin domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TY07_ALIDB rbh
peptidoglycan-binding lysin domain-containing protein rbh
Peptidoglycan-binding lysm protein {ECO:0000313|EMBL:GAO26328.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_expt_300_bf_scaffold_401_26
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23648..24082)
DNA (435bp) protein (145aa)
Rhodanese domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY06_ALIDB rbh
rhodanese domain-containing protein rbh
Rhodanese domain-containing protein {ECO:0000313|EMBL:GAO26327.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
SCNpilot_expt_300_bf_scaffold_401_27
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24144..25031)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMV7_9BURK rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_401_28
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25071..25808)
DNA (738bp) protein (246aa)
Phospholipid/glycerol acyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY04_ALIDB rbh
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:GAO26325.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_expt_300_bf_scaffold_401_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25891..26466)
DNA (576bp) protein (192aa)
D,D-heptose 1,7-bisphosphate phosphatase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY03_ALIDB rbh
histidinol-phosphate phosphatase family protein rbh
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:ADU98402.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" so
SCNpilot_expt_300_bf_scaffold_401_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26512..28677)
DNA (2166bp) protein (722aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14) rbh
Glycine--tRNA ligase beta subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY02_ALIDB rbh
Displaying items 1-30 of 31 in total

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