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SCNpilot_expt_300_bf_scaffold_1100

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1100_1
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190..1395
DNA (1206bp) protein (402aa)
Integrase family protein n=4 Tax=Proteobacteria RepID=B2UA34_RALPJ
Integrase {ECO:0000313|EMBL:KHK65604.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;
Integrase
SCNpilot_expt_300_bf_scaffold_1100_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1392..2546
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSP3_THISH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL72947.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
SCNpilot_expt_300_bf_scaffold_1100_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2944..3330
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002EAE580
Uncharacterized protein {ECO:0000313|EMBL:AKC05738.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
DNA repair protein RadC
SCNpilot_expt_300_bf_scaffold_1100_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3390..3812)
DNA (423bp) protein (141aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029, ECO:0000313|EMBL:KIL06583.1}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudom
arsC3; arsenate reductase (EC:1.20.4.1)
Arsenate reductase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L2E7_PSEAI
SCNpilot_expt_300_bf_scaffold_1100_5
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3826..4908)
DNA (1083bp) protein (361aa)
Putative sodium bile acid symporter family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9D2_BORPD
sodium bile acid symporter family protein
Putative sodium bile acid symporter family protein {ECO:0000313|EMBL:CAP41355.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sou
SCNpilot_expt_300_bf_scaffold_1100_6
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4921..5403)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIB3_METPP
hypothetical protein
Glyoxalase-like domain protein {ECO:0000313|EMBL:KCB41862.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hin
SCNpilot_expt_300_bf_scaffold_1100_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5375..5704)
DNA (330bp) protein (110aa)
Regulatory protein ArsR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGB9_ALIDK
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEB83989.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_1100_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6097..6447
DNA (351bp) protein (117aa)
transposase n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002F6D369
Uncharacterized protein {ECO:0000313|EMBL:AKC05739.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1100_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6513..6791
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI00030CBA3E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC05740.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
SCNpilot_expt_300_bf_scaffold_1100_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6855..7718)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MBZ1_PSEAI rbh
Universal stress family protein {ECO:0000313|EMBL:KDD60131.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella br
universal stress protein UspA
SCNpilot_expt_300_bf_scaffold_1100_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7731..8813)
DNA (1083bp) protein (361aa)
Sulfate transporter n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L3Z1_PSEAI
Inorganic anion transporter, SulP family {ECO:0000313|EMBL:KDD60149.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bord
sulP; sulfate transporter
SCNpilot_expt_300_bf_scaffold_1100_12
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8837..9058
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC53275.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus
SCNpilot_expt_300_bf_scaffold_1100_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9771..10205)
DNA (435bp) protein (145aa)
Putative transposase, IS4/IS5 family n=1 Tax=Variovorax paradoxus B4 RepID=T1X6P5_VARPD
putative transposase, IS4/IS5 family
Putative transposase, IS4/IS5 family {ECO:0000313|EMBL:AGU47840.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor
SCNpilot_expt_300_bf_scaffold_1100_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10807..11631
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA44_RALPJ
Uncharacterized protein {ECO:0000313|EMBL:AKC05741.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1100_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11696..13684
DNA (1989bp) protein (663aa)
plasmid stablization protein ParB n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002E289C8 rbh
Chromosome-partitioning protein Spo0J {ECO:0000313|EMBL:AKC05742.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
plasmid stablization protein ParB
SCNpilot_expt_300_bf_scaffold_1100_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13747..13956
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003169597
Uncharacterized protein {ECO:0000313|EMBL:AKC05743.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1100_17
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14084..14602)
DNA (519bp) protein (173aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=U8TW89_PSEAI rbh
GCN5 family acetyltransferase {ECO:0000313|EMBL:KEX89628.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas put
Acetyltransferase
SCNpilot_expt_300_bf_scaffold_1100_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15340..15654
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002DD434D
Uncharacterized protein {ECO:0000313|EMBL:GAO21790.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1100_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16012..16305)
DNA (294bp) protein (98aa)
transcriptional regulator n=1 Tax=Pseudomonas aeruginosa RepID=UPI000310BAAC
Anaerobic benzoate catabolism transcriptional regulator {ECO:0000313|EMBL:AKC05745.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
helix-turn-helix domain-containing protein
Displaying 19 items

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