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SCNpilot_expt_300_bf_scaffold_1894

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1894_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..366)
DNA (366bp) protein (122aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GU57_9BRAD
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:ERF81102.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
sohB; proteinase
SCNpilot_expt_300_bf_scaffold_1894_2
unknown

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482..580
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1894_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(605..1378)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIT4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28991.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1894_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1366..1590)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSC6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41233.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1894_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1729..2739
DNA (1011bp) protein (337aa)
octaprenyl-diphosphate synthase (EC:2.5.1.-)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF44_9BRAD">RepID=K8PF44_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41232.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
SCNpilot_expt_300_bf_scaffold_1894_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2762..3262)
DNA (501bp) protein (167aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKL9_AFIFE
SCNpilot_expt_300_bf_scaffold_1894_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3262..3591)
DNA (330bp) protein (110aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=3 Tax=Oligotropha carboxidovorans RepID=B6JEW5_OLICO
SCNpilot_expt_300_bf_scaffold_1894_8
unknown

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comp(3709..3840)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1894_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3906..5699)
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E7E3DF rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41230.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1894_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5907..6647)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V954_9BRAD rbh
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:CEG08904.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
putative transmembrane protein
SCNpilot_expt_300_bf_scaffold_1894_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6697..8358)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKF5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41229.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
putative electron transfer flavoprotein dehydrogenases
Displaying 11 items

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