ggKbase home page

SCNpilot_expt_300_bf_scaffold_6099

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_6099_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1360)
DNA (1359bp) protein (453aa)
TolC n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL60_9BRAD rbh
TolC {ECO:0000313|EMBL:EGP07713.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
tolC; outer membrane efflux protein TolC
SCNpilot_expt_300_bf_scaffold_6099_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1594..2751
DNA (1158bp) protein (386aa)
acetyl-CoA hydrolase n=1 Tax=Afipia birgiae RepID=UPI000365AC15
Uncharacterized protein {ECO:0000313|EMBL:EKS41974.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6099_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2718..3389
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PMD6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42741.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6099_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3386..3493)
DNA (108bp) protein (36aa)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ABJ05784.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABJ05784.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizob
SCNpilot_expt_300_bf_scaffold_6099_5
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3490..4119)
DNA (630bp) protein (210aa)
Enoyl CoA hydratase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2W9_BRAJP
Enoyl-CoA hydratase {ECO:0000313|EMBL:AHY52042.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonic
enoyl CoA hydratase
SCNpilot_expt_300_bf_scaffold_6099_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4199..4621)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRE1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28753.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6099_7
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5020..5571
DNA (552bp) protein (184aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH46_9BRAD
sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:KJC53593.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
SCNpilot_expt_300_bf_scaffold_6099_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5568..5972
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI82_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28751.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6099_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6185..6784)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D6E0ED
Uncharacterized protein {ECO:0000313|EMBL:EKS42746.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6099_10
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6798..7223)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000369DF20
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJC53588.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
SCNpilot_expt_300_bf_scaffold_6099_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7371..8363)
DNA (993bp) protein (331aa)
Diguanylate cyclase n=2 Tax=Oligotropha carboxidovorans RepID=B6JG49_OLICO rbh
GGDEF domain-containing protein
GGDEF domain protein {ECO:0000313|EMBL:AEI06133.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovor
SCNpilot_expt_300_bf_scaffold_6099_12
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8671..9309
DNA (639bp) protein (213aa)
RNA polymerase sigma factor n=1 Tax=Afipia birgiae RepID=UPI000307BCF9 rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:KJC49410.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
RNA polymerase sigma factor
SCNpilot_expt_300_bf_scaffold_6099_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9306..9998
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL70_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07723.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6099_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10049..10303
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUD8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41983.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
Displaying 14 items

View Taxonomy