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SCNpilot_expt_300_bf_scaffold_9700

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_9700_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..504
DNA (504bp) protein (168aa)
MltA domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G2_9BRAD
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:CEG10069.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi
mltA; membrane-bound lytic murein transglycosylase A
SCNpilot_expt_300_bf_scaffold_9700_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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501..1142
DNA (642bp) protein (214aa)
Smr protein/MutS2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G3_9BRAD
Recombination and DNA strand exchange inhibitor protein {ECO:0000313|EMBL:CEG10068.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
Smr domain-containing protein
SCNpilot_expt_300_bf_scaffold_9700_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1224..2534)
DNA (1311bp) protein (437aa)
ATP-dependent protease n=1 Tax=Afipia birgiae RepID=UPI0002D7F56A
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=709797 species="Bacteria; Proteobac
hslU; ATP-dependent hsl protease ATP-binding subunit HslU
SCNpilot_expt_300_bf_scaffold_9700_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2680..3234)
DNA (555bp) protein (185aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=883078 specie
ATP-dependent protease subunit HslV n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZU7_9BRAD rbh
ATP-dependent protease peptidase subunit
SCNpilot_expt_300_bf_scaffold_9700_5
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3382..3705
DNA (324bp) protein (108aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EGQ9_9RHOB
SCNpilot_expt_300_bf_scaffold_9700_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3767..4261
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NZJ6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33904.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
SCNpilot_expt_300_bf_scaffold_9700_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4258..4857
DNA (600bp) protein (200aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Oligotropha carboxidovorans RepID=B6JCG3_OLICO
SCNpilot_expt_300_bf_scaffold_9700_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4854..5591
DNA (738bp) protein (246aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01014};; Phosphoribosylform
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Oligotropha carboxidovorans RepID=HIS4_OLICO rbh
SCNpilot_expt_300_bf_scaffold_9700_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5591..6364
DNA (774bp) protein (258aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000255|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000255|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Oligotropha carboxidovorans RepID=HIS6_OLICO rbh
hisF; imidazole glycerol phosphate synthase subunit HisF
SCNpilot_expt_300_bf_scaffold_9700_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6416..6583
DNA (168bp) protein (56aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
phosphoribosyl-ATP pyrophosphatase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036C2FE6
phosphoribosyl-ATP pyrophosphohydrolase
Displaying 10 items

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