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SCNpilot_expt_300_bf_scaffold_3380_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1332..1958)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002F7632E similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 186.0
  • Bit_score: 261
  • Evalue 6.40e-67
Uncharacterized protein {ECO:0000313|EMBL:EKS39588.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 185.0
  • Bit_score: 256
  • Evalue 2.90e-65
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 187.0
  • Bit_score: 217
  • Evalue 3.00e-54

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGACAGGTCTTCTGATAGCACTGGCGGCGGGTCTCGCCTCGGCAACGATGTTCGCATCGATTGTCTCGGGGGCGGCGATCTCGCTTTTGCTGTTCTATCTCGCCCCGCTGCCGCTGATGACCGTCGGCCTCGGCTGGGGCTCGAGCACCGCCGCGATCGGCGGCCTGATCGGCGCGCTCGGCGTCGGCGGCGTGTTCGGACTGCCCTATATCGCGGCCTTCGCGGTCACCGTGGCACTGCCGGCCTGGTGGCTCGGGCACCTGATTTTGCTGGCACGGCCGGTGTCCTCCGATCCGCAGCTTGCCGGTCTCGCGCCCGCGCTCGACTGGTATCCGATCGGCCGCCTGCTGGTGTGGATCGCCATATTCGCCTCGATCACCACCGTGAGCGCGATGCTGACGCTCGGCACCGATGCCGAAACCATTCACGCCGGCCTGCGCAACGTGCTGATCCGCATGGGCGGCATCAGCAACGAGCACCTCGCCAACGAATCGGTGAACCGCACCGTCAACGCGCTGGCGGCCCTCGCGCCGGGCGCGGCGACGCTGATCGCAGCCGCGAACTGCCGGCCACGGCGCTCGCCGCCCTCGGCGTGGCGATCCTGCTCTGCCTCGCCGGCGGCCTGA
PROTEIN sequence
Length: 209
MTGLLIALAAGLASATMFASIVSGAAISLLLFYLAPLPLMTVGLGWGSSTAAIGGLIGALGVGGVFGLPYIAAFAVTVALPAWWLGHLILLARPVSSDPQLAGLAPALDWYPIGRLLVWIAIFASITTVSAMLTLGTDAETIHAGLRNVLIRMGGISNEHLANESVNRTVNALAALAPGAATLIAAANCRPRRSPPSAWRSCSASPAA*