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SCNpilot_expt_300_bf_scaffold_3380_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2209..2448)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RS18_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 1.90e-35
rpsR; 30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 5.30e-36
30S ribosomal protein S18 {ECO:0000255|HAMAP-Rule:MF_00270}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter win similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 2.60e-35

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGCTGACGCAGCCGCACGCCGCCCGTTCTTCCGCCGTCGCAAGACCTGCCCGTTCACGGGCGCCAACGCGCCGAAGATCGACTACAAGGATTCCAAGCTGTTGATGCGTTACGTTTCCGAGCGCGGCAAGATCGTGCCGAGCCGCATCACCGCCGTTTCGGCCAAGAAGCAGCGTGAACTCGCCCGCGCCATCAAGCGCGCGCGCTTTCTCGGCCTGCTACCGTACGTGATCCGCTAA
PROTEIN sequence
Length: 80
MADAAARRPFFRRRKTCPFTGANAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIKRARFLGLLPYVIR*