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SCNpilot_expt_300_bf_scaffold_3380_5

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2454..2912)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6 n=1 Tax=Afipia birgiae RepID=UPI0002D6F932 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 158.0
  • Bit_score: 274
  • Evalue 5.30e-71
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 269
  • Evalue 2.40e-69
30S ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 158.0
  • Bit_score: 259
  • Evalue 5.00e-67

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGCCTCTTTACGAGCATGTTTTTCTCGCGCGTCAGGATGCGAGCGCCCAGCAGGTCGAAGAGTTCACCACCCAGATCACCGGCGTGATCGAGAGCCAGGGCGGCAAGGTCACCAAGACCGAGAACTGGGGCGTGCGCTCCCTCACCTACCGCATGAACAAGAACCGCAAGGCGCATTTCATGCTGCTCAACATCGACGCCCCCGCCGCGGTGGTCGCCGAGATCGAGCGCCAGGAGCGCATCAACGAAGACATCATCCGCTACCTCACCGTCCGCGTCGACGAGCTGGAGGAAGGCCCGTCCGCCATGATGCGCAAGGCCGACCGTGACCGCGAACGCGACGATCGTGGCGGCTTCCGCGGCGACCGCGATGGCGGTCCGCGCGAAGGTGGTTTCCGTGGCGATCGCGGCCCGCGCCGCCCGCGCGACGAAGACGCAACTGCATCGGTTGAGGAGTAA
PROTEIN sequence
Length: 153
MPLYEHVFLARQDASAQQVEEFTTQITGVIESQGGKVTKTENWGVRSLTYRMNKNRKAHFMLLNIDAPAAVVAEIERQERINEDIIRYLTVRVDELEEGPSAMMRKADRDRERDDRGGFRGDRDGGPREGGFRGDRGPRRPRDEDATASVEE*