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SCNpilot_expt_300_bf_scaffold_1651_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1884..2873

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 336.0
  • Bit_score: 571
  • Evalue 8.30e-160
leuA; 2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 336.0
  • Bit_score: 567
  • Evalue 2.40e-159
2-isopropylmalate synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQI1_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 336.0
  • Bit_score: 571
  • Evalue 5.90e-160

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGGTCGGCGATGGATTCGACCCGGACGAATACCGGCGGATGTTCAAGACCGTGCGCGAGCGGGTGCCGAACGCCGACAAGGCGATCTTCTCGGTGCACTGCCATGACGATCTGGGGTTGGCCGTCGCCAACTCGCTGGCCGGCGTCGAGGGCGGCGCGCGCCAGATCGAGTGCACCGTCAACGGCATCGGCGAGCGGGCGGGCAACGCCGCGCTGGAAGAGGTCGTGATGGCGATCAAAACCCGCGGCGACGTCATGCCGTACTGGTGCAACGTCGAGAGCACGATGCTGACCCGCGCCTCCAAGCTGGTGTCGGCGGCGACCTCGTTCGCGGTGCAGTACAACAAGGCCATCGTCGGACGGAATGCGTTTTCGCACGAGAGCGGCATCCATCAGGACGGCATGCTGAAAAATGCCCAGACCTACGAGATCATGACGCCGGAGAGTGTCGGCGTGAAGCAGACCTCGCTGGTGATGGGCAAGCATTCCGGCCGCCACGCCTTCCAGCACAAGCTGGAGGAACTGGGCTACAAGCTGGGCGAGAACCAGTTGCAGGATGCGTTCGTGCGCTTCAAGGCGTTCGATCAGGAACTGGCGACCTCGCACGATCACATCCGTCTGGTGTCGCTGACGGTGATCGCCGGCACCCATGGTCCGCAGCGCGCCACCATGAAGGTGGAAGTGGACGGCAAGGTCAGGATCGACGAGGCGGAAGGCAACGGCCCGGTCGATGCGGTGTTCAACGCCATCAAGTCGCTGGTGCCGCACGAGGCCAGGCTGGAACTGTATCAGGTCCACGCCGTGACCGAAGGCACCGACGCGCAGGCCGAGGTGTCGGTGCGGCTGTCGCAGGACGGCCGCTCGATGACCGCACGTGCCTCCGATCCGGATACGCTGGTGGCCTCGGCCAAGGCGTATCTCAGCGCGCTGAACAAGATCGTGATGAAGCGCCAGCGCGACATTCCGGCCGCCGCGGCGGCGGGACACTGA
PROTEIN sequence
Length: 330
MVGDGFDPDEYRRMFKTVRERVPNADKAIFSVHCHDDLGLAVANSLAGVEGGARQIECTVNGIGERAGNAALEEVVMAIKTRGDVMPYWCNVESTMLTRASKLVSAATSFAVQYNKAIVGRNAFSHESGIHQDGMLKNAQTYEIMTPESVGVKQTSLVMGKHSGRHAFQHKLEELGYKLGENQLQDAFVRFKAFDQELATSHDHIRLVSLTVIAGTHGPQRATMKVEVDGKVRIDEAEGNGPVDAVFNAIKSLVPHEARLELYQVHAVTEGTDAQAEVSVRLSQDGRSMTARASDPDTLVASAKAYLSALNKIVMKRQRDIPAAAAAGH*