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SCNpilot_expt_300_bf_scaffold_1651

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1651_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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85..1089
DNA (1005bp) protein (335aa)
PPK2 family polyphosphate:nucleotide phosphotransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDU8_9BRAD rbh
PPK2 family polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:EKS36533.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1651_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1884..2873
DNA (990bp) protein (330aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQI1_AFIFE
SCNpilot_expt_300_bf_scaffold_1651_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3170..3766
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4Y6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36526.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1651_4
unknown

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4403..4876
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1651_5
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4940..6616
DNA (1677bp) protein (559aa)
RND transporter n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00036C6AB8 rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACL60459.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Met
SCNpilot_expt_300_bf_scaffold_1651_6
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7450..7611)
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS57385.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
SCNpilot_expt_300_bf_scaffold_1651_7
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9191..9655
DNA (465bp) protein (155aa)
Acriflavin resistance protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQE6_METNO
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ACL60458.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylob
SCNpilot_expt_300_bf_scaffold_1651_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9689..10234
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEV5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF82190.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
copper-binding protein
SCNpilot_expt_300_bf_scaffold_1651_9
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10490..11179)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS63121.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
SCNpilot_expt_300_bf_scaffold_1651_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11326..13119
DNA (1794bp) protein (598aa)
Nitrite extrusion protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBW1_OLICO
Nitrite extrusion protein NarK {ECO:0000313|EMBL:AEI07608.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
narK; nitrite extrusion protein NarK
SCNpilot_expt_300_bf_scaffold_1651_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13130..13315
DNA (186bp) protein (62aa)
nitrate reductase subunit alpha (EC:1.7.99.4)
Nitrate reductase, alpha subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPC8_AFIFE
Respiratory nitrate reductase 1 alpha chain {ECO:0000313|EMBL:CEG07063.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia f
Displaying 11 items

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