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SCNpilot_expt_300_bf_scaffold_1651_5

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 4940..6616

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00036C6AB8 similarity UNIREF
DB: UNIREF100
  • Identity: 50.1
  • Coverage: 581.0
  • Bit_score: 532
  • Evalue 4.00e-148
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 569.0
  • Bit_score: 520
  • Evalue 4.40e-145
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACL60459.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Met similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 569.0
  • Bit_score: 520
  • Evalue 2.20e-144

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Taxonomy

Methylobacterium nodulans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGCTTTCCGGAATTCGTGCTGCGCGTGGCGCGGCCATCGTGCTTGCCATTTTGCTCGGCTTGACGCCGTTCCTGCCGCTGTCGGCCCATGACGACCACGATCATGCGGCGTCCGCCCCACCGCCGGCCGCCAATGTCGCGCCGCGCGCCGAAGTCGCCTCCGATCTCTACGAGCTTGTCGCCGTCGCGCAGAGCGGCGAACTCGTGCTCTATCTCGACGATTTCGCCAGCAACGCTCCGGTGGAGGGCGCCAGCGTCGAAGTGAAGACGCCGTCCGGCACGCATGCGGCGAGCAGTAAATCGGGCACGCCCTATCACATCCACGCGCCGTGGACGGCGACGCCCGGAAGTTACGATCTCGACGTCACGGTAACGCGAGGCGGCCGCAGCGATCTGTTGCCGCTGACGCTGGTCATTCCCGTTGCGGACGGACATGAGGCGGAGACGGCGGCGGGCGGCGGCATCGCCGACTGGCTACGACATAATCTGCTGCTGGTTCTGGTCGCCGGGCTGATCGGCGCGGCGATCGGTTATTTCGTTGCGCGGCGGGTGCGCCGGCCAGCCGGTGTGGCCTCGATGCTCGTGCTGGCGGCGATGCTGGCGGGCGTTGTGCCGTCGCCATCGTCGGCGCATGACGGGCAGGATGGCGCGAGCGATGCCGCGCCGAACGAGATCGCGCGCGACGCCGCCAAGCGGCTCGCCGACGGCGCGGTGTTCATGCCGAAAAGCACGCAGCGCATTCTGGCGGTCCGCAGCATGGTGACGCAATCGTCGGTGCAGCGCCGCGCCATCGAACTGCCGGGCCGGGTGATGCCCGATCCCAACGCCAGCGGCTATGTGCAGGCTTCGGTCGGCGGGCGGCTGTCGCCGCCGGCGGGCGGCTTTCCGCGTCTCGGCTCCATGGTGAAGAAGGGGGACGTTCTCGCTTATGTCGAGCCGCCGATCCAGGCGATCGACCTGTCCGACATGCGTCAGCGCCAGGGCGAACTCGATCAGCAGATGTCGATCGTGGAGCGGCGCCTCGCGCGTTACGAGACGCTGGTGCCGGGCGGCGCGGTGCCGCGCTCGCAACTCGAGGACACCCGGATCGAATTGCAGGGGCTGAAGGACCGCCGGGCGGCGCTCGACAAGGCGCGGCGCGAGCCGGAGGCGCTGATCGCACCGGTCGATGGCGTGATTGCCGAGGGCGTGCCGGTGGCGGGGCAGATCGCGCCGTCGAATGCGGTGATCTTCAACGTCGTCGATCCGGCGCGGCTGTGGGTCGAGGCGCTGACCATCGACGCGGTGCCGCAGATTCACAGCGCTTTCGCGCGCTCGGGACAGGACAGGAGCTATCCGCTGTCTTTCCGCGGCTCGGGTTTCGCCGGCCGCAACCAGTCGATCCCGGTGCAGTTCGCGGTGGAGGGCGACAATGCCGGCCTGCATGCCGGACAGTTCGTCACCGTGCTGGTGACCACGGCCGAGGAGCGCACCGGCATCGCCGTGCCGCGCGCCGCCATCGTGCGGAGCGGCAGCGGTCAGGACGTGGTCTACGAGCATGTCTCCGCCGAGCAGTTCGTGCCGCGCGTGGTGCGGACCGAGCCGCTCGACGGTGAGCGCGTCTTTGTCGCCAGCGGGCTGGATGAGGGCCACCGCATCGTGGTGCAGGGTGCCGAATTGCTCGGCCAGGTGCGATAG
PROTEIN sequence
Length: 559
MLSGIRAARGAAIVLAILLGLTPFLPLSAHDDHDHAASAPPPAANVAPRAEVASDLYELVAVAQSGELVLYLDDFASNAPVEGASVEVKTPSGTHAASSKSGTPYHIHAPWTATPGSYDLDVTVTRGGRSDLLPLTLVIPVADGHEAETAAGGGIADWLRHNLLLVLVAGLIGAAIGYFVARRVRRPAGVASMLVLAAMLAGVVPSPSSAHDGQDGASDAAPNEIARDAAKRLADGAVFMPKSTQRILAVRSMVTQSSVQRRAIELPGRVMPDPNASGYVQASVGGRLSPPAGGFPRLGSMVKKGDVLAYVEPPIQAIDLSDMRQRQGELDQQMSIVERRLARYETLVPGGAVPRSQLEDTRIELQGLKDRRAALDKARREPEALIAPVDGVIAEGVPVAGQIAPSNAVIFNVVDPARLWVEALTIDAVPQIHSAFARSGQDRSYPLSFRGSGFAGRNQSIPVQFAVEGDNAGLHAGQFVTVLVTTAEERTGIAVPRAAIVRSGSGQDVVYEHVSAEQFVPRVVRTEPLDGERVFVASGLDEGHRIVVQGAELLGQVR*