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SCNpilot_expt_300_bf_scaffold_3718_5

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2409..4217)

Top 3 Functional Annotations

Value Algorithm Source
sdhA; succinate dehydrogenase flavoprotein subunit SdhA (EC:1.3.99.1) similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 604.0
  • Bit_score: 1141
  • Evalue 0.0
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 604.0
  • Bit_score: 1141
  • Evalue 0.0
Succinate dehydrogenase flavoprotein subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JAS5_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 604.0
  • Bit_score: 1141
  • Evalue 0.0
  • rbh

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGGCGGCCAGCAGCAAGTCCGGACCGGCCTACCCGATCGAGGACCACACCTACGACGTGATCGTGGTCGGCGCCGGCGGCGCGGGCCTGCGCGCGGTGGTCGGCTGCTCCGAAGCGGGCCTGCGCACCGCCTGCATCACCAAGGTGTTTCCGACCCGCTCGCACACCGTGGCGGCGCAGGGCGGCATCTCCGCCTCGCTCGGCAACATGCATCCCGACGACTGGCGCTGGCACATGTACGACACCGTCAAGGGATCGGACTGGCTCGGCGATCAGGACTCCATCGAATACATGGTGCGCAACGCACCCGAAGCGGTCTACGAGCTCGAACATTGGGGCGTGCCGTTCTCGCGCACCGAGGAAGGCAAGATCTTCCAGCGTCCGTTCGGCGGCATGACCGTCGATTACGGCAAGGGCCAGGCGCAGCGCACCTGCGCCGCGGCCGACCGCACCGGCCACGCCATGCTGCACACGATGTACGGCCAGGCACTGCGCCATTCGGCGGAATTCTTCATCGAGTTCTTCGCCATCGATCTCATCATGGACGACCAGGGCGTCTGCCGCGGCGTGATCGCCCTCAAGCTCGACGACGGCACGCTGCATCGCTTCCGCGCCCAGACCACCATCCTCGCCACCGGCGGCTATGGCCGCGCCTATCTGTCCTGCACCTCGGCGCACACCTGCACCGGCGACGGCGGCGGCATGGCGCTGCGCGCGGGAATCGCGATGCAGGACATGGAGTTCGTTCAATTCCATCCGACCGGCATCTTCCCGGCGGGCTGCCTCATCACCGAGGGCGCGCGCGGCGAAGGCGGTTATCTGTCGAACGCCGAAGGCGAGCGCTTCATGGAGCGCTATGCGCCATCCGCCAAGGATCTCGCCTCGCGCGACGTGGTCTCGCGCGCCATGACCATCGAGATCCGCGAAGGCCGCGGCGTCGGCAAGAAGAAGGATCATATGTTCCTTCATCTCGACCATCTCGATCCCGCGGTGCTGCACGAGCGGCTGCCGGGCATTTCGGAATCGGCGAAGATTTTCGCCGGCGTCGACGTCACCCGCGAGCCGATCCCGGTGCTGCCGACCGTGCATTACAACATGGGCGGCATCCCGACCAACTTCCACGGCGAAGTCGTGATCAAGAAGGGCGACGACAACGACGCGGTGGTGCCCGGCCTGATGGCGCTCGGCGAAGCCGCCTGCGTCTCGGTGCATGGCGCCAACCGCCTCGGCTCCAATTCGCTGATCGACCTCGTGGTGTTCGGCCGCTCGGCGGCGCTGCGCTGCGCCGAGAAACTCACCGCCAACGCCAAGCAGCCCGACCTGCCGAGCAACTCCGCCGAACTCGCGCTCGGCCGGCTCGACCGTTTCCGTTATGCCTCCGGCGGCACGCCGACCGCGCGGCTGCGCGATTCCATGCAGCGCGTGATGCAGAACAATTGCTCTGTGTTCCGCACCGGCGAGGTGCTGCGCGAGGGCCAGGACCTGATCCACAAGGTCAAGGGCGGCGTCTCCGACATCGACGTCACCGACCGCACGCTGGTGTGGAATACCGATCTCGTCGAGACGCTGGAGTTCGACAATCTGATCGCGCAGGCGGTGGTGACGATGGACTCGGCGGCGAACCGCACCGAGAGCCGCGGTGCGCATGCCCGCGAGGATTTCGCCGAGCGCGACGACAAGAACTGGATGAAGCACACGCTGGCCTGGGCCGACGCCAAGGGCAACACCGCGATCGATTACCGCCCCGTGCACAGCTACACGATGACCAACGACGTTCAGTACATTCCGCCGAAAGCGCGCGTGTACTGA
PROTEIN sequence
Length: 603
MAASSKSGPAYPIEDHTYDVIVVGAGGAGLRAVVGCSEAGLRTACITKVFPTRSHTVAAQGGISASLGNMHPDDWRWHMYDTVKGSDWLGDQDSIEYMVRNAPEAVYELEHWGVPFSRTEEGKIFQRPFGGMTVDYGKGQAQRTCAAADRTGHAMLHTMYGQALRHSAEFFIEFFAIDLIMDDQGVCRGVIALKLDDGTLHRFRAQTTILATGGYGRAYLSCTSAHTCTGDGGGMALRAGIAMQDMEFVQFHPTGIFPAGCLITEGARGEGGYLSNAEGERFMERYAPSAKDLASRDVVSRAMTIEIREGRGVGKKKDHMFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREPIPVLPTVHYNMGGIPTNFHGEVVIKKGDDNDAVVPGLMALGEAACVSVHGANRLGSNSLIDLVVFGRSAALRCAEKLTANAKQPDLPSNSAELALGRLDRFRYASGGTPTARLRDSMQRVMQNNCSVFRTGEVLREGQDLIHKVKGGVSDIDVTDRTLVWNTDLVETLEFDNLIAQAVVTMDSAANRTESRGAHAREDFAERDDKNWMKHTLAWADAKGNTAIDYRPVHSYTMTNDVQYIPPKARVY*