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SCNpilot_expt_300_bf_scaffold_3718

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_3718_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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266..643
DNA (378bp) protein (126aa)
Membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAS7_OLICO
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:AEI04958.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_expt_300_bf_scaffold_3718_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(660..908)
DNA (249bp) protein (83aa)
methyltransferase n=1 Tax=Afipia birgiae RepID=UPI000312ED0A
FkbM family methyltransferase {ECO:0000313|EMBL:EKS34829.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3718_3
unknown

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931..1575
DNA (645bp) protein (215aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3718_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1461..2318)
DNA (858bp) protein (286aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWZ0_9BRAD
SCNpilot_expt_300_bf_scaffold_3718_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2409..4217)
DNA (1809bp) protein (603aa)
sdhA; succinate dehydrogenase flavoprotein subunit SdhA (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
Succinate dehydrogenase flavoprotein subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JAS5_OLICO rbh
SCNpilot_expt_300_bf_scaffold_3718_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4221..4619)
DNA (399bp) protein (133aa)
succinate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002E46FEB
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EKS34839.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
succinate dehydrogenase hydrophobic membrane anchor protein subunit
SCNpilot_expt_300_bf_scaffold_3718_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4616..4951)
DNA (336bp) protein (112aa)
succinate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002D711EE
Succinate dehydrogenase {ECO:0000313|EMBL:KIZ35441.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
succinate dehydrogenase, cytochrome b subunit
SCNpilot_expt_300_bf_scaffold_3718_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5408..6094
DNA (687bp) protein (229aa)
Membrane protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JAS2_OLICO rbh
membrane protein
Putative permease {ECO:0000313|EMBL:AEI04964.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans
SCNpilot_expt_300_bf_scaffold_3718_9
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6121..6840)
DNA (720bp) protein (240aa)
malonyl-CoA synthase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037572E0
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJN11897.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
malonyl-CoA synthase
Displaying 9 items

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