ggKbase home page

SCNpilot_expt_300_bf_scaffold_5173_6

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(4714..6915)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipi similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 675.0
  • Bit_score: 1034
  • Evalue 0.0
divL; sensor protein DivL (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 675.0
  • Bit_score: 1019
  • Evalue 6.80e-295
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1V9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 675.0
  • Bit_score: 1033
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2202
ATGCCGGGCGTCCTTGGGACGATGCGTCGAGCCGTCTTGTCATGCACAGCGATCGTGCATGGCGGCATCGTCAGCGTGGCTGCCGGGATCGGGCCGGCGCATGCGGCCGAGAGCGGCGTACTCGGCGACATCGGCACCATCCTTGGCAGTCTCGAGCGGCAGGAAATCGCCGCGCTGATGGTCGCCGCTTCGGTGCTCGGCTTCTCGGTGGTGGCCGCGATCCTGCTGATGCGCACCCGCATCCGCGCCGCGACGATTGAAAGCGGCCTGCGCGCCGAGAACCAGACACTGCAGAACGAGACCGACCGGCTGCGCGCGCTGCTGTTCGCCGAACCGCAGGTGCTGATCTCCTGGGCTGCGGGCGAGGACCGGCCCGAGATCGGCGGCGACGTCGCACTGCTGATGCCGCCGGGTCAATCGGCGCAACCGCAGCAGCGCATTCTCGCTTTCGGCACCTGGCTTCATCCCGAACAGGCGCTGCAGATGGATCACGCGGTCGATGCGCTGCGCGAGGCCGGCGAGAGCTTCCTGCTCAACCTCACAGCCGCCAACGGCCGCACCTTCGAGGTGATGGGCCGCGCCATCGGCGGCCAGGCCATCGTGCGGATCCGCGAATTGTCCGGCGTGCGCATGGAACTGGCGGACATGACGCTGCGCCACCGCGCACTGATCGAGGAGACCGAGGCGCTGCGCGCCTTCGCAGCCGCGATGCCGCAGCCAATGTGGGTGCGGCGCGACGACGGTACGCTGACATTCGCCAACGCGGCCTATGCGCAGGCGGCGGAAGCCGCGAGCCCGCGGGAGGCGATCGAACGCAACGTCGAACTGCTCGACAGCGCCGACCGCGCCGACATGGCGCGCGCGCTGGCGCAGAGTCAGGCCTACAATGCCCGCGTGCCGGTGGCGATCGGCGGCCAGCGACGCATCTTCGACGTCCACGCGCTCAACGTCAAAGGCGGCAGCGCCGGTGTCGCGATCGACGCCAGCGAGGCGGCCGAACTCACCGCCGCTCTGGTGCGGATGGCGGATGCACACCGCCGCATGCTCGACCAGCTCTCGTCGGGCGTCGCGGTGTTCGACTCCGGCAAGCGCCTCGCCTTCTACAACGATTCCTACCGGCGGCTGTGGGACCTCGACCCCGCCTTCCTCGATTCCAATCCCGACGATTCCAGCGTGCTGGAAAAACTGCGGGCGATGCGCAAGATCTCCGAGCAGCCGGATTTCCGAGCCTGGAAGGCCAAGCTGCACGAGGCCTATCGCGCGGTCGAACCGGCCAAGGACACCTGGTATCTGCCCGACGGCCGCGCCATCAGCATTGTCACCGCACCGAACCCCGAAGGCAGCGTCACCTACCTGTTCGACGATGTCACCGAAAGCCTGAAGCTGCAGCGCCAGCATGACGGCCTCCTGCGCGTCCAGCGCGAGACGCTCGACAATCTTGCCGAGGCGGTCGCGGTGTTCGGCGGCAATGGCCGCGCGCAACTGTTCAATCCCTCTTTCGCGCAGATGTGGAAACTGTCGCCGGACGCGCTGGCGCAGCAGCCCCATATCGAAGCGATCGAGCAATGGTGCCGGCCGCTGCTCGACGACGACGCGGCCTGGCAAACCATGCGCGCCGCGATCACCGGCATCGACAACCGCAAGGCGGTGCAGCTACGGCTGGAACGCCGCGACGGCAGCGTGCTCGACTGCATGACCACACCGCTGCCCGACGGCGCCACCATGCTGACCTTCCAGGACGTGACCGACAGCGTGAACGTCGAGCGCGCGCTACGCGAGCGCAACGAGGCGCTGGAAGCCGCCGACCAGATGAAGGTCGATTTCGTCCATCACGTCTCCTACGAGCTGCGCTCGCCGCTCACCACCATCATCGGCTTCGCGCACTTCCTCAACGATCCGGCCACCGGACCGATGACGCAGAAGCAGAACGAATATCTCGGCTACATCACCACGTCGACCAACGCGCTGCTCGCGATCATCAACAACATCCTCGATCTGGCCACCATCGATGCCGGGGCGATGACCGGCTCGAGCGCGAGGGCATTGCGCTGCGTGTCGAGATCGATCCCTCGCTCGGCAGCTTCGTGGCCGACGAGCGCCGCATCGTGCAGGTGCTCTACAACCTGCTCGCCAACGCCATCGGCTTCTCGCCGCCGAGCAGCACGGTCGCCATCAACGCCTGGCGCAGCGACGGCAGCGTGA
PROTEIN sequence
Length: 734
MPGVLGTMRRAVLSCTAIVHGGIVSVAAGIGPAHAAESGVLGDIGTILGSLERQEIAALMVAASVLGFSVVAAILLMRTRIRAATIESGLRAENQTLQNETDRLRALLFAEPQVLISWAAGEDRPEIGGDVALLMPPGQSAQPQQRILAFGTWLHPEQALQMDHAVDALREAGESFLLNLTAANGRTFEVMGRAIGGQAIVRIRELSGVRMELADMTLRHRALIEETEALRAFAAAMPQPMWVRRDDGTLTFANAAYAQAAEAASPREAIERNVELLDSADRADMARALAQSQAYNARVPVAIGGQRRIFDVHALNVKGGSAGVAIDASEAAELTAALVRMADAHRRMLDQLSSGVAVFDSGKRLAFYNDSYRRLWDLDPAFLDSNPDDSSVLEKLRAMRKISEQPDFRAWKAKLHEAYRAVEPAKDTWYLPDGRAISIVTAPNPEGSVTYLFDDVTESLKLQRQHDGLLRVQRETLDNLAEAVAVFGGNGRAQLFNPSFAQMWKLSPDALAQQPHIEAIEQWCRPLLDDDAAWQTMRAAITGIDNRKAVQLRLERRDGSVLDCMTTPLPDGATMLTFQDVTDSVNVERALRERNEALEAADQMKVDFVHHVSYELRSPLTTIIGFAHFLNDPATGPMTQKQNEYLGYITTSTNALLAIINNILDLATIDAGAMTGSSARALRCVSRSIPRSAASWPTSAASCRCSTTCSPTPSASRRRAARSPSTPGAATAA*