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SCNpilot_expt_300_bf_scaffold_5173

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_5173_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1628)
DNA (1626bp) protein (542aa)
DNA helicase/exodeoxyribonuclease V, subunit B {ECO:0000313|EMBL:ABE60958.1}; EC=3.1.11.5 {ECO:0000313|EMBL:ABE60958.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS39_NITHX
hypothetical protein
SCNpilot_expt_300_bf_scaffold_5173_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1687..2388)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLT9_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30086.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
nucleotidyl transferase
SCNpilot_expt_300_bf_scaffold_5173_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2520..2840)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P963_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34893.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_expt_300_bf_scaffold_5173_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2943..4472)
DNA (1530bp) protein (510aa)
YjeE family ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2F1_9BRAD rbh
YjeE family ATPase {ECO:0000313|EMBL:EKS34894.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_5173_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4469..4714)
DNA (246bp) protein (82aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
divL; sensor protein DivL (EC:2.7.13.3)
histidine kinase n=1 Tax=Afipia birgiae RepID=UPI0002D31B35
SCNpilot_expt_300_bf_scaffold_5173_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4714..6915)
DNA (2202bp) protein (734aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipi
divL; sensor protein DivL (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1V9_9BRAD
SCNpilot_expt_300_bf_scaffold_5173_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7055..7513)
DNA (459bp) protein (153aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000255|HAMAP-Rule:MF_00116}; Short=dUTPase {ECO:0000255|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000255|HAMAP-Rule:MF_00116};; dUTP pyrophosphata
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=DUT_BRADU
SCNpilot_expt_300_bf_scaffold_5173_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7510..8883)
DNA (1374bp) protein (458aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX35_9BRAD
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EKS34897.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
SCNpilot_expt_300_bf_scaffold_5173_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8959..9600)
DNA (642bp) protein (214aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizob
ubiB; 2-polyprenylphenol 6-hydroxylase (EC:1.14.13.-)
2-polyprenylphenol 6-hydroxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1W2_9BRAD
SCNpilot_expt_300_bf_scaffold_5173_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10384..10794)
DNA (411bp) protein (137aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-meth
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXE9_9BRAD
Displaying 10 items

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