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SCNpilot_expt_300_bf_scaffold_6846_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(3595..3906)

Top 3 Functional Annotations

Value Algorithm Source
Acriflavin resistance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 103.0
  • Bit_score: 190
  • Evalue 9.00e-46
Multidrug transporter MdtB {ECO:0000313|EMBL:CEG08114.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 103.0
  • Bit_score: 190
  • Evalue 1.30e-45
multidrug resistance protein MdtB similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 101.0
  • Bit_score: 189
  • Evalue 4.30e-46

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GGCATGTCGCCCTATGATGCGATCGTGCAGGCGTGCCTGCTGCGCTTCCGCCCCATTATGATGACCACGCTGGCGGCGTTGTTCGGCGCGCTGCCGCTCGCGATTGAAAGCGGCACCGGCGCGGAGCTGCGCTTTCCGCTCGGCATTTCGATCATCGGCGGCCTGCTGCTCAGCCAGATCCTGACGCTCTACACCACGCCGGTGATCTATCTCGCGCTCGACCGCATCAACCGGCGGCTGGAGAACGCCGTGCCGCCGGCGGGCGATCTGCCGTCGCCGCCGATCGCCGGCGCGACCGAGGGAGTCCAGTAA
PROTEIN sequence
Length: 104
GMSPYDAIVQACLLRFRPIMMTTLAALFGALPLAIESGTGAELRFPLGISIIGGLLLSQILTLYTTPVIYLALDRINRRLENAVPPAGDLPSPPIAGATEGVQ*