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SCNpilot_expt_300_bf_scaffold_16510_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2..694)

Top 3 Functional Annotations

Value Algorithm Source
translation initiation factor IF-2 n=1 Tax=Afipia birgiae RepID=UPI0002F83F22 similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 239.0
  • Bit_score: 351
  • Evalue 6.80e-94
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 240.0
  • Bit_score: 349
  • Evalue 3.60e-93
infB; translation initiation factor IF-2 similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 241.0
  • Bit_score: 323
  • Evalue 4.30e-86

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCTGATACCAAGAACCCTGGCGACAAGACGCTGAGCGTCGGGACCAAGACTCTGTCGCTGAAGCCGCGGACAGAGACCGGCGTGGTGCGCCAGAGCTTCAGCCATGGCCGAACCAAATCGGTGGTGGTTGAGAAGAAAACCAAGCGCCGTCTGGCTGGCGAGCCGGCCCCGGCCGCCGAAACCGCCACTCCTGCACCGGCACCGGCGCAGCCTGCGCCGGGACGTCCCGCGCCGGCCGCCACCCGCGCGCCCGCGCGTCCCTCCGGCGTCGTGCTGCGGACCCTGACCGAAGACGAGCAGAGCGCGCGCGCCCATGCGCTGGCCGATGCCCGGATTCGCGAGGAAGAAGAGCGCCGCGCCGCCGAGGCGGAAGCCGCGCGCCGCAACACCAAGGAATTCAAGGAACAGCAGGAGCGTGAAGCCGCCGAGGCCCGCAGGAAGGCCGAGGAAGAGCGTCACCGCGTCGAAGAGGAAGCCAAGGCCAAGGCCGAACGCGAAGCCAAGAAGCGCTTCGGCGAGGAAGCCAAGGCGAAGGTCGAGCGTCCCGCCGCCGCCACGCCCGCGCGTCCGGCGCCGGTGGCCGCCGACGGCTCCGACGAAGACGAAGCGCCGCGCATGGTGCGCCGTCCGGGCGGCGGTCCCGCGCGCCCCGTTGTTGCGCCGAAGCCGACCGCAAAGCCCGGCCCGGCG
PROTEIN sequence
Length: 231
MADTKNPGDKTLSVGTKTLSLKPRTETGVVRQSFSHGRTKSVVVEKKTKRRLAGEPAPAAETATPAPAPAQPAPGRPAPAATRAPARPSGVVLRTLTEDEQSARAHALADARIREEEERRAAEAEAARRNTKEFKEQQEREAAEARRKAEEERHRVEEEAKAKAEREAKKRFGEEAKAKVERPAAATPARPAPVAADGSDEDEAPRMVRRPGGGPARPVVAPKPTAKPGPA